Evaluation and comparison of bioinformatic tools for the enrichment analysis of metabolomics data

被引:0
|
作者
Anna Marco-Ramell
Magali Palau-Rodriguez
Ania Alay
Sara Tulipani
Mireia Urpi-Sarda
Alex Sanchez-Pla
Cristina Andres-Lacueva
机构
[1] University of Barcelona,Biomarkers & Nutrimetabolomics Laboratory, Nutrition, Food Science and Gastronomy Department, Food Technology Reference Net (XaRTA), Nutrition and Food Safety Research Institute (INSA
[2] CIBER Fragilidad y Envejecimiento Saludable [CIBERfes],UB), Faculty of Pharmacy and Food Sciences, Pharmacy and Food Science Faculty
[3] Instituto de Salud Carlos III [ISCIII],Genetics, Microbiology and Statistics Department, Biology Faculty
[4] University of Barcelona,undefined
[5] Statistics and Bioinformatics Unit,undefined
[6] Vall d’Hebron Institut de Recerca (VHIR),undefined
来源
关键词
Bioinformatic tools; Database; Enrichment; HumanCyc; KEGG; Metabolite; Metabolomics; Over-representation analysis; Pathway; Reactome;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] The use of metabolomics tools in the evaluation of the fattening performance of lambs
    Kahraman, Mucahit
    Das, Aydin
    Gungoren, Gulsah
    Das, Besime Dogan
    Yalcin, Hamza
    Koyuncu, Ismail
    Akmese, Sukru
    MEDYCYNA WETERYNARYJNA-VETERINARY MEDICINE-SCIENCE AND PRACTICE, 2022, 78 (09): : 461 - 467
  • [32] Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
    Robert C McLeay
    Timothy L Bailey
    BMC Bioinformatics, 11
  • [33] Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
    McLeay, Robert C.
    Bailey, Timothy L.
    BMC BIOINFORMATICS, 2010, 11
  • [34] Evaluation and Analysis of Business Intelligence Data Visualization Tools
    Lousa, Andre
    Pedrosa, Isabel
    Bernardino, Jorge
    2019 14TH IBERIAN CONFERENCE ON INFORMATION SYSTEMS AND TECHNOLOGIES (CISTI), 2019,
  • [35] Computational Tools for the Secondary Analysis of Metabolomics Experiments
    Booth, Sean C.
    Weljie, Aalim M.
    Turner, Raymond J.
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2013, 4 (05): : e201301003
  • [36] Prospects in data mining: bioinformatic tools for gene regulatory pathway studies
    McNutt, MC
    Smith, JL
    Gardner, K
    FASEB JOURNAL, 2003, 17 (04): : A388 - A388
  • [37] Bioinformatic tools for analyzing high-throuput mass spectrometry data
    Cannon, WR
    Jarman, K
    Jarman, K
    Willse, AR
    Heredia-Langner, A
    FASEB JOURNAL, 2003, 17 (05): : A988 - A988
  • [38] Bioinformatic tools for tRNA gene analyses in mitochondrial DNA sequence data
    Romanova, Elena V.
    Bukin, Yurij S.
    Sherbakov, Dmitry Yu.
    DATA IN BRIEF, 2020, 29
  • [39] New tools improve bioprocess operations - Applying metabolomics and multivariate data analysis tools for strain improvement and medium optimization
    van der Werf, Mariet
    GENETIC ENGINEERING NEWS, 2006, 26 (13): : 44 - 45
  • [40] A comparison of data envelopment analysis and ratio analysis as tools for performance assessment
    Thanassoulis, E
    Boussofiane, A
    Dyson, RG
    OMEGA-INTERNATIONAL JOURNAL OF MANAGEMENT SCIENCE, 1996, 24 (03): : 229 - 244