PROMO: an interactive tool for analyzing clinically-labeled multi-omic cancer datasets

被引:0
|
作者
Dvir Netanely
Neta Stern
Itay Laufer
Ron Shamir
机构
[1] Tel Aviv University,Blavatnik School of Computer Science
来源
关键词
Cancer genomics; Personalized medicine; Cancer subtypes; Multi-omics; Cancer biomarkers; Multi-omic clustering; Gene expression analysis;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] Investigating molecular and genetic contributions to racial disparities in prostate cancer by integrating multi-omic datasets available in public.
    Hightower, Alexandria J.
    Rhie, Suhn K.
    Falzarano, Sara M.
    Buxbaum, Sarah
    CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2023, 32 (01) : 252 - 253
  • [32] MosaicNeedles: A tool for multi-omic liquid biopsy sensitivity and specificity enhancement.
    Quan, Qimin
    Wilkinson, Joe
    Ritchey, Joshua
    Kaiser, Alaina
    Geanacopoulos, John
    Boyce, John
    JOURNAL OF CLINICAL ONCOLOGY, 2021, 39 (15)
  • [33] Multi-omic and multi-view clustering algorithms: review and cancer benchmark
    Rappoport, Nimrod
    Shamir, Ron
    NUCLEIC ACIDS RESEARCH, 2018, 46 (20) : 10546 - 10562
  • [34] Essential Regression: A generalizable framework for inferring causal latent factors from multi-omic datasets
    Bing, Xin
    Lovelace, Tyler
    Bunea, Florentina
    Wegkamp, Marten
    Kasturi, Sudhir Pai
    Singh, Harinder
    Benos, Panayiotis, V
    Das, Jishnu
    PATTERNS, 2022, 3 (05):
  • [35] Multi-omic blood test for early detection of cancer and pre-cancer
    Baker, M.
    Cameron, J. M.
    Brennan, P.
    Butler, H.
    Antoniou, G.
    Christie, L.
    Conn, J.
    Connal, S.
    McHardy, R.
    Sala, A.
    Smith, B.
    Palmer, D.
    CLINICAL CHEMISTRY, 2024, 70
  • [36] Multi-omic machine learning predictor of chemotherapy response of esophageal cancer
    Sasagawa, Shota
    Kato, Hiroaki
    Nagaoka, Koji
    Todd, Johnson
    Maejima, Kazuhiro
    Okawa, Yuki
    Kakimi, Kazuhiro
    Yasuda, Takushi
    Nakagawa, Hidewaki
    CANCER SCIENCE, 2023, 114 : 1012 - 1012
  • [37] Synthetic augmentation of cancer cell line multi-omic datasets using unsupervised deep learning (vol 15, 10390, 2024)
    Cai, Zhaoxiang
    Apolinario, Sofia
    Baiao, Ana R.
    Pacini, Clare
    Sousa, Miguel D.
    Vinga, Susana
    Reddel, Roger R.
    Robinson, Phillip J.
    Garnett, Mathew J.
    Zhong, Qing
    Goncalves, Emanuel
    NATURE COMMUNICATIONS, 2025, 16 (01)
  • [38] Multi-omic serum biomarkers for prognosis of disease progression in prostate cancer
    Michael A. Kiebish
    Jennifer Cullen
    Prachi Mishra
    Amina Ali
    Eric Milliman
    Leonardo O. Rodrigues
    Emily Y. Chen
    Vladimir Tolstikov
    Lixia Zhang
    Kiki Panagopoulos
    Punit Shah
    Yongmei Chen
    Gyorgy Petrovics
    Inger L. Rosner
    Isabell A. Sesterhenn
    David G. McLeod
    Elder Granger
    Rangaprasad Sarangarajan
    Viatcheslav Akmaev
    Alagarsamy Srinivasan
    Shiv Srivastava
    Niven R. Narain
    Albert Dobi
    Journal of Translational Medicine, 18
  • [39] Multi-omic machine learning predictor of breast cancer therapy response
    Sammut, Stephen-John
    Crispin-Ortuzar, Mireia
    Chin, Suet-Feung
    Provenzano, Elena
    Bardwell, Helen A.
    Ma, Wenxin
    Cope, Wei
    Dariush, Ali
    Dawson, Sarah-Jane
    Abraham, Jean E.
    Dunn, Janet
    Hiller, Louise
    Thomas, Jeremy
    Cameron, David A.
    Bartlett, John M. S.
    Hayward, Larry
    Pharoah, Paul D.
    Markowetz, Florian
    Rueda, Oscar M.
    Earl, Helena M.
    Caldas, Carlos
    NATURE, 2022, 601 (7894) : 623 - +
  • [40] Multi-omic serum biomarkers for prognosis of disease progression in prostate cancer
    Kiebish, Michael A.
    Cullen, Jennifer
    Mishra, Prachi
    Ali, Amina
    Milliman, Eric
    Rodrigues, Leonardo O.
    Chen, Emily Y.
    Tolstikov, Vladimir
    Zhang, Lixia
    Panagopoulos, Kiki
    Shah, Punit
    Chen, Yongmei
    Petrovics, Gyorgy
    Rosner, Inger L.
    Sesterhenn, Isabell A.
    McLeod, David G.
    Granger, Elder
    Sarangarajan, Rangaprasad
    Akmaev, Viatcheslav
    Srinivasan, Alagarsamy
    Srivastava, Shiv
    Narain, Niven R.
    Dobi, Albert
    JOURNAL OF TRANSLATIONAL MEDICINE, 2020, 18 (01)