Functional annotation of novel lineage-specific genes using co-expression and promoter analysis

被引：0
|
作者：
Charu G Kumar
Robin E Everts
Juan J Loor
Harris A Lewin
机构：
[1] University of Illinois at Urbana-Champaign,Department of Animal Sciences
[2] 210 Edward R Madigan Laboratory,Institute for Genomic Biology
[3] University of Illinois at Urbana-Champaign,undefined
[4] SEQUENOM,undefined
[5] Inc,undefined
来源：
BMC Genomics | / 11卷
关键词：
Transcription Factor Binding Site; Functional Inference; Immune System Development; PLAC Cluster; Glycerophospholipid Metabolism;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [41] Integrative Analysis of Oleosin Genes Provides Insights into Lineage-Specific Family Evolution in Brassicales
    Zou, Zhi
    Zhang, Li
    Zhao, Yongguo
    PLANTS-BASEL, 2024, 13 (02):
  • [42] Use of pan-genome analysis for the identification of lineage-specific genes of Helicobacter pylori
    van Vliet, Arnoud H. M.
    FEMS MICROBIOLOGY LETTERS, 2017, 364 (02)
  • [43] Identification of hub genes correlated with sleep deprivation using co-expression analysis
    Hao-jie Xu
    Shi-zhu Lin
    Kai Shi
    Jin-jia Qiu
    Jia-Min Hu
    Zeng-gui Yu
    Dong-sheng Dai
    Na Zhang
    Min Liang
    Hong-da Cai
    Kai Zeng
    Xiao-dan Wu
    Sleep and Breathing, 2021, 25 : 1969 - 1976
  • [44] Analysis of bHLH coding genes using gene co-expression network approach
    Srivastava, Swati
    Sanchita
    Singh, Garima
    Singh, Noopur
    Srivastava, Gaurava
    Sharma, Ashok
    MOLECULAR BIOLOGY REPORTS, 2016, 43 (07) : 677 - 685
  • [45] Construction of a promoter collection for genes co-expression in filamentous fungus Trichoderma reesei
    Wang, Wei
    Meng, Fanju
    Liu, Pei
    Yang, Shengli
    Wei, Dongzhi
    JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 2014, 41 (11) : 1709 - 1718
  • [46] Identification of hub genes correlated with sleep deprivation using co-expression analysis
    Xu, Hao-jie
    Lin, Shi-zhu
    Shi, Kai
    Qiu, Jin-jia
    Hu, Jia-Min
    Yu, Zeng-gui
    Dai, Dong-sheng
    Zhang, Na
    Liang, Min
    Cai, Hong-da
    Zeng, Kai
    Wu, Xiao-dan
    SLEEP AND BREATHING, 2021, 25 (04) : 1969 - 1976
  • [47] Analysis of bHLH coding genes using gene co-expression network approach
    Swati Srivastava
    Garima Sanchita
    Noopur Singh
    Gaurava Singh
    Ashok Srivastava
    Molecular Biology Reports, 2016, 43 : 677 - 685
  • [48] Identification of key genes in colorectal cancer diagnosis by co-expression analysis weighted gene co-expression network analysis
    Mortezapour, Mahdie
    Tapak, Leili
    Bahreini, Fatemeh
    Najafi, Rezvan
    Afshar, Saeid
    COMPUTERS IN BIOLOGY AND MEDICINE, 2023, 157
  • [49] Four Novel Prognostic Genes Related to Prostate Cancer Identified Using Co-expression Structure Network Analysis
    Feng, Tao
    Wei, Dechao
    Li, Qiankun
    Yang, Xiaobing
    Han, Yili
    Luo, Yong
    Jiang, Yongguang
    FRONTIERS IN GENETICS, 2021, 12
  • [50] Annotation of gene function in citrus using gene expression information and co-expression networks
    Wong, Darren C. J.
    Sweetman, Crystal
    Ford, Christopher M.
    BMC PLANT BIOLOGY, 2014, 14
12345