Designed divergent evolution of enzyme function

被引:0
|
作者
Yasuo Yoshikuni
Thomas E. Ferrin
Jay D. Keasling
机构
[1] UCSF/UCB Joint Graduate Group in Bioengineering,California Institute for Quantitative Biomedical Research (QB3)
[2] Department of Chemical Engineering,Synthetic Biology Department, Physical Bioscience Division
[3] University of California at Berkeley,Department of Pharmaceutical Chemistry and Biopharmaceutical Sciences
[4] Lawrence Berkeley National Laboratory,undefined
[5] University of California at San Francisco,undefined
来源
Nature | 2006年 / 440卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Natural molecular evolution has created enzymes designed to catalyse a single reaction, by modifying enzymes that were once much less choosy. Yoshikuni et al. have developed a method of designing synthetic enzymes using a mathematical model that mimics the mechanisms of molecular evolution. They use the system to produce a series of novel sesquiterpene cyclases that use different reaction pathways to produce different end-products. This demonstrates the feasibility of exploiting the evolvability of an enzyme scaffold to produce more pure versions of existing molecules or to create new molecules that do not exist in nature.
引用
收藏
页码:1078 / 1082
页数:4
相关论文
共 50 条
  • [31] THE AMAZON - DIVERGENT EVOLUTION AND DIVERGENT VIEWS
    MARCUS, J
    RESEARCH & EXPLORATION, 1994, 10 (04): : 384 - 397
  • [32] Fish lysozyme gene family evolution and divergent function in early development
    Li, Lisen
    Cardoso, Joao C. R.
    Felix, Rute C.
    Mateus, Ana Patricia
    Canario, Adelino V. M.
    Power, Deborah M.
    DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY, 2021, 114
  • [33] The role of protein dynamics in the evolution of new enzyme function
    Campbell, Eleanor
    Kaltenbach, Miriam
    Correy, Galen J.
    Carr, Paul D.
    Porebski, Benjamin T.
    Livingstone, Emma K.
    Afriat-Jurnou, Livnat
    Buckle, Ashley M.
    Weik, Martin
    Hollfelder, Florian
    Tokuriki, Nobuhiko
    Jackson, Colin J.
    NATURE CHEMICAL BIOLOGY, 2016, 12 (11) : 944 - +
  • [34] Influence of metabolic network structure and function on enzyme evolution
    Dennis Vitkup
    Peter Kharchenko
    Andreas Wagner
    Genome Biology, 7
  • [35] Understanding enzyme function evolution from a computational perspective
    Tyzack, Jonathan D.
    Furnham, Nicholas
    Sillitoe, Ian
    Orengo, Christine M.
    Thornton, Janet M.
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2017, 47 : 131 - 139
  • [36] Influence of metabolic network structure and function on enzyme evolution
    Vitkup, Dennis
    Kharchenko, Peter
    Wagner, Andreas
    GENOME BIOLOGY, 2006, 7 (05)
  • [37] Role of conformational dynamics in the evolution of novel enzyme function
    Maria-Solano, Miguel A.
    Serrano-Hervas, Eila
    Romero-Rivera, Adrian
    Iglesias-Fernandez, Javier
    Osuna, Silvia
    CHEMICAL COMMUNICATIONS, 2018, 54 (50) : 6622 - 6634
  • [38] The role of protein dynamics in the evolution of new enzyme function
    Eleanor Campbell
    Miriam Kaltenbach
    Galen J Correy
    Paul D Carr
    Benjamin T Porebski
    Emma K Livingstone
    Livnat Afriat-Jurnou
    Ashley M Buckle
    Martin Weik
    Florian Hollfelder
    Nobuhiko Tokuriki
    Colin J Jackson
    Nature Chemical Biology, 2016, 12 : 944 - 950
  • [39] ON DIVERGENT AND PROGRESSIVE EVOLUTION
    LOVTRUP, S
    ALTERNATIVE LIFE-HISTORY STYLES OF ANIMALS, 1989, 6 : 55 - 69
  • [40] Divergent evolution of enzymatic function: Mechanistically diverse superfamilies and functionally distinct suprafamilies
    Gerlt, JA
    Babbitt, PC
    ANNUAL REVIEW OF BIOCHEMISTRY, 2001, 70 : 209 - 246