Automatic real-time monitoring of fungal spores: the case of Alternaria spp.

被引：0
|
作者：
Sophie Erb
Alexis Berne
Nina Burgdorfer
Bernard Clot
Marie-José Graber
Gian Lieberherr
Christine Sallin
Fiona Tummon
Benoît Crouzy
机构：
[1] MeteoSwiss,Surface Measurements
[2] École Polytechnique Fédérale de Lausanne,Environmental Remote Sensing Laboratory
来源：
Aerobiologia | 2024年 / 40卷
关键词：
Fungal spores; Automatic monitoring; Machine learning; Real-time;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
We present the first implementation of the monitoring of airborne fungal spores in real-time using digital holography. To obtain observations of Alternaria spp. spores representative of their airborne stage, we collected events measured in the air during crop harvesting in a contaminated potato field, using a Swisens Poleno device. The classification algorithm used by MeteoSwiss for operational pollen monitoring was extended by training the system using this additional dataset. The quality of the retrieved concentrations is evaluated by comparison with parallel measurements made with a manual Hirst-type trap. Correlations between the two measurements are high, especially over the main dispersion period of Alternaria spp., demonstrating the potential for automatic real-time monitoring of fungal spores.
引用
收藏
页码：123 / 127
页数：4
相关论文
共 50 条
  • [21] Quantification of Bifidobacterium spp. and Lactobacillus spp. in rat fecal samples by real-time PCR
    Delroisse, Jean-Marc
    Boulvin, Anne-Lise
    Parmentier, Isabelle
    Dauphin, Robin Dubois
    Vandenbol, Micheline
    Portetelle, Daniel
    MICROBIOLOGICAL RESEARCH, 2008, 163 (06) : 663 - 670
  • [22] Micro Sensors for Real-time Monitoring of Mold Spores and Pollen
    Tsuruzoe, Kei
    Hara, Kazuhiro
    BIODEVICES: PROCEEDINGS OF THE 2015 INTERNATIONAL CONFERENCE ON BIOMEDICAL ELECTRONICS AND DEVICES, 2015, : 174 - 179
  • [23] Using real-time PCR to survey azoxystrobin-resistant Alternaria spp. from almond and pistachio orchards in California
    Luo, Y.
    Ma, Z.
    Reyes, H.
    Morgan, D.
    Michailides, T. J.
    PHYTOPATHOLOGY, 2006, 96 (06) : S71 - S71
  • [24] Development and evaluation of a real-time PCR for genotyping of Cryptosporidium spp. from water monitoring slides
    Elwin, Kristin
    Robinson, Guy
    Perez-Cordon, Gregorio
    Chalmers, Rachel M.
    EXPERIMENTAL PARASITOLOGY, 2022, 242
  • [25] Potential sources of airborne Alternaria spp. spores in South-west Spain
    Fernandez-Rodriguez, Santiago
    Sadys, Magdalena
    Smith, Matt
    Tormo-Molina, Rafael
    Skjoth, Carsten Ambelas
    Maria Maya-Manzano, Jose
    Silva-Palacios, Inmaculada
    Gonzalo-Garijo, Angela
    SCIENCE OF THE TOTAL ENVIRONMENT, 2015, 533 : 165 - 176
  • [26] Real-time monitoring of fungal inhibition and morphological changes
    Aunsbjerg, S. D.
    Andersen, K. R.
    Knochel, S.
    JOURNAL OF MICROBIOLOGICAL METHODS, 2015, 119 : 196 - 202
  • [27] Detection of Cryptosporidium spp. in stool by multiplex real-time pcr
    Stroup, Suzanne E.
    Houpt, Eric R.
    AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE, 2005, 73 (06): : 223 - 223
  • [28] The development of a real-time PCR assay for the identification of Fusarium spp.
    Green, J.
    Mcaleer, P.
    Dempsey, K.
    Stirling, E.
    MYCOSES, 2017, 60 : 107 - 108
  • [29] Real-Time Electrochemical LAMP for DNA Detection of Salmonella spp.
    Huang, Tsung-Tao
    Tang, Yu-Hsiang
    Wang, Jun-Sheng
    Lin, Yi-Mei
    Huang, Sheng-Tung
    2018 13TH ANNUAL IEEE INTERNATIONAL CONFERENCE ON NANO/MICRO ENGINEERED AND MOLECULAR SYSTEMS (NEMS 2018), 2018, : 365 - 368
  • [30] Alternaria stem spot -: a new emerging fungal disease on Berberis spp.
    Mirabadi, S.
    Rezaee, S.
    Golnaraghi, A. R.
    CANADIAN JOURNAL OF PLANT PATHOLOGY-REVUE CANADIENNE DE PHYTOPATHOLOGIE, 2006, 28 (02): : 359 - 359
12345