NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences

被引:0
|
作者
Ksenia Khelik
Karin Lagesen
Geir Kjetil Sandve
Torbjørn Rognes
Alexander Johan Nederbragt
机构
[1] University of Oslo,Biomedical Informatics Research Group, Department of Informatics
[2] Norwegian Veterinary Institute,Department of Microbiology
[3] Oslo University Hospital,Centre for Ecological and Evolutionary Synthesis, Department of Biosciences
[4] University of Oslo,undefined
来源
关键词
Whole-genome alignment; Comparative analysis; Whole-genome assembly; Annotation of differences;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [41] CLIFF, a bioinformatics software tool to explore molecular differences between two sets of cancer cell lines
    Wernitznig, Andreas
    Lipp, Jesse J.
    Zichner, Thomas
    Gerlach, Daniel
    Bauer, Markus J.
    Voss, Tilman
    Schlattl, Andreas
    Haslinger, Christian
    Montgomery, Philip G.
    Zamanighomi, Mahdi
    Sellers, William R.
    Kraut, Norbert
    CANCER RESEARCH, 2020, 80 (16)
  • [42] Large deviations for random sums of differences between two sequences of random variables with applications to risk theory
    Yang Yang
    Jie Liu
    Yuquan Cang
    Journal of Inequalities and Applications, 2012
  • [43] Characterization of whole-genome autosomal differences of DNA methylation between men and women
    Singmann, Paula
    Shem-Tov, Doron
    Wahl, Simone
    Grallert, Harald
    Fiorito, Giovanni
    Shin, So-Youn
    Schramm, Katharina
    Wolf, Petra
    Kunze, Sonja
    Baran, Yael
    Guarrera, Simonetta
    Vineis, Paolo
    Krogh, Vittorio
    Panico, Salvatore
    Tumino, Rosario
    Kretschmer, Anja
    Gieger, Christian
    Peters, Annette
    Prokisch, Holger
    Relton, Caroline L.
    Matullo, Giuseppe
    Illig, Thomas
    Waldenberger, Melanie
    Halperin, Eran
    EPIGENETICS & CHROMATIN, 2015, 8
  • [44] Characterization of whole-genome autosomal differences of DNA methylation between men and women
    Paula Singmann
    Doron Shem-Tov
    Simone Wahl
    Harald Grallert
    Giovanni Fiorito
    So-Youn Shin
    Katharina Schramm
    Petra Wolf
    Sonja Kunze
    Yael Baran
    Simonetta Guarrera
    Paolo Vineis
    Vittorio Krogh
    Salvatore Panico
    Rosario Tumino
    Anja Kretschmer
    Christian Gieger
    Annette Peters
    Holger Prokisch
    Caroline L. Relton
    Giuseppe Matullo
    Thomas Illig
    Melanie Waldenberger
    Eran Halperin
    Epigenetics & Chromatin, 8
  • [45] Large deviations for random sums of differences between two sequences of random variables with applications to risk theory
    Yang, Yang
    Liu, Jie
    Cang, Yuquan
    JOURNAL OF INEQUALITIES AND APPLICATIONS, 2012,
  • [46] In-depth biological characterization of two black soldier fly anti-Pseudomonas peptides reveals LPS-binding and immunomodulating effects
    Van Moll, Laurence
    Wouters, Milan
    De Smet, Jeroen
    De Vooght, Linda
    Delputte, Peter
    Van Der Borght, Mik
    Cos, Paul
    MSPHERE, 2023, 8 (05)
  • [47] Substantial DNA methylation differences between two major neuronal subtypes in human brain
    Kozlenkov, Alexey
    Wang, Minghui
    Roussos, Panos
    Rudchenko, Sergei
    Barbu, Mihaela
    Bibikova, Marina
    Klotzle, Brandy
    Dwork, Andrew J.
    Zhang, Bin
    Hurd, Yasmin L.
    Koonin, Eugene V.
    Wegner, Michael
    Dracheva, Stella
    NUCLEIC ACIDS RESEARCH, 2016, 44 (06) : 2593 - 2612
  • [48] Genetic differences between two sympatric morphs of Arctic charr confirmed by microsatellite DNA
    Westgaard, JI
    Klemetsen, A
    Knudsen, R
    JOURNAL OF FISH BIOLOGY, 2004, 65 (04) : 1185 - 1191
  • [49] DIFFERENCES IN REPEATED DNA-SEQUENCES BETWEEN CALLUS AND SHOOT TISSUE OF SUGARCANE (SACCHARUM-OFFICINARUM L)
    HENDRE, RR
    GUPTA, VS
    MASCARENHAS, AF
    RANJEKAR, PK
    RAMAKRISHNA, T
    PANDIT, MW
    INDIAN JOURNAL OF BIOCHEMISTRY & BIOPHYSICS, 1986, 23 (02): : 80 - 86
  • [50] In-depth exploration of the synergistic interplay between perovskite barium titanate nanoparticles and two-dimensional graphene oxide for flexible piezoelectric nanogenerators
    Han, Jin Kyu
    Song, Da Som
    Lim, Yi Rang
    Song, Wooseok
    Myung, Sung
    Lee, Sun Sook
    An, Ki-Seok
    Jung, Ha-Kyun
    Santucci, Simone
    Esposito, Vincenzo
    Lim, Jongsun
    APPLIED SURFACE SCIENCE, 2021, 538