NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences

被引：0
|
作者：
Ksenia Khelik
Karin Lagesen
Geir Kjetil Sandve
Torbjørn Rognes
Alexander Johan Nederbragt
机构：
[1] University of Oslo,Biomedical Informatics Research Group, Department of Informatics
[2] Norwegian Veterinary Institute,Department of Microbiology
[3] Oslo University Hospital,Centre for Ecological and Evolutionary Synthesis, Department of Biosciences
[4] University of Oslo,undefined
来源：
BMC Bioinformatics | / 18卷
关键词：
Whole-genome alignment; Comparative analysis; Whole-genome assembly; Annotation of differences;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [1] NucDiff: in-depth characterization and annotation of differences between two sets of DNA sequences
    Khelik, Ksenia
    Lagesen, Karin
    Sandve, Geir Kjetil
    Rognes, Torbjorn
    Nederbragt, Alexander Johan
    BMC BIOINFORMATICS, 2017, 18
  • [2] Identification of differential abundance of satellite DNA sequences in Asclepias (Apocynaceae): in-depth characterization of species-specific sequences
    Costa, Graziele Clemente
    Almeida, Cicero
    PLANT SYSTEMATICS AND EVOLUTION, 2022, 308 (06)
  • [3] Identification of differential abundance of satellite DNA sequences in Asclepias (Apocynaceae): in-depth characterization of species-specific sequences
    Graziele Clemente Costa
    Cicero Almeida
    Plant Systematics and Evolution, 2022, 308
  • [4] An In-depth Analysis of Jailbreaking Through Domain Characterization of LLM Training Sets
    Pelaez-Gonzalez, Carlos
    Herrera-Poyatos, Andres
    Herrera-Triguero, Francisco
    HYBRID ARTIFICIAL INTELLIGENT SYSTEMS, PT II, HAIS 2024, 2025, 14858 : 116 - 127
  • [5] In-Depth Characterization of Two Bioactive Coatings Obtained Using MAPLE on TiTaZrAg
    Prodana, Mariana
    Stoian, Andrei Bogdan
    Ionita, Daniela
    Brajnicov, Simona
    Boerasu, Iulian
    Enachescu, Marius
    Burnei, Cristian
    MATERIALS, 2024, 17 (12)
  • [6] EOSINOPHILIC GASTROINTESTINAL DISEASE: AN IN-DEPTH ANALYSIS OF THE SIMILARITIES AND DIFFERENCES BETWEEN RACE AND SEX
    Smith, E.
    Dimmitt, R.
    Atkinson, P.
    JOURNAL OF INVESTIGATIVE MEDICINE, 2014, 62 (02) : 559 - 559
  • [7] ConsDiff: Identification of conserved differences between sets of amino acid sequences
    Mehta, S
    Dinakarpandian, D
    14TH INTERNATIONAL WORKSHOP ON DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS, 2003, : 21 - 24
  • [8] The number of alignments between two DNA sequences
    Andrade, Helena
    Nieto, Juan J.
    Torres, Angela
    INTERNATIONAL JOURNAL OF BIOMATHEMATICS, 2016, 9 (04)
  • [9] In-depth compositional uniformity of CuInSe2 prepared by two-stage growth sequences
    Alberts, V
    Chenene, ML
    JOURNAL OF PHYSICS D-APPLIED PHYSICS, 1999, 32 (24) : 3093 - 3098
  • [10] In-depth investigation of the interaction between DNA and nano-sized graphene oxide
    Lee, Jieon
    Yim, Yeajee
    Kim, Seongchan
    Choi, Myung-Ho
    Choi, Byong-Seok
    Lee, Younghoon
    Min, Dal-Hee
    CARBON, 2016, 97 : 92 - 98
12345