Active DNA demethylation at enhancers during the vertebrate phylotypic period

被引：0

作者：

Ozren Bogdanović

Arne H Smits

Elisa de la Calle Mustienes

Juan J Tena

Ethan Ford

Ruth Williams

Upeka Senanayake

Matthew D Schultz

Saartje Hontelez

Ila van Kruijsbergen

Teresa Rayon

Felix Gnerlich

Thomas Carell

Gert Jan C Veenstra

Miguel Manzanares

Tatjana Sauka-Spengler

Joseph R Ecker

Michiel Vermeulen

José Luis Gómez-Skarmeta

Ryan Lister

机构：

[1] Australian Research Council Centre of Excellence in Plant Energy Biology,Department of Molecular Biology

[2] University of Western Australia,Department of Molecular Developmental Biology

[3] Centro Andaluz de Biología del Desarrollo,undefined

[4] Consejo Superior de Investigaciones Científicas,undefined

[5] Universidad Pablo de Olavide,undefined

[6] Harry Perkins Institute of Medical Research,undefined

[7] Faculty of Science,undefined

[8] Radboud Institute for Molecular Life Sciences,undefined

[9] Radboud University,undefined

[10] Weatherall Institute of Molecular Medicine,undefined

[11] University of Oxford,undefined

[12] Genomic Analysis Laboratory,undefined

[13] Salk Institute for Biological Studies,undefined

[14] Faculty of Science,undefined

[15] Radboud Institute for Molecular Life Sciences,undefined

[16] Radboud University,undefined

[17] Centro Nacional de Investigaciones Cardiovasculares,undefined

[18] Centre for Integrated Protein Science,undefined

[19] Ludwig Maximilians Universität München,undefined

[20] Howard Hughes Medical Institute,undefined

[21] Salk Institute for Biological Studies,undefined

来源：

Nature Genetics | 2016年 / 48卷

关键词：

D O I：

暂无

中图分类号：

学科分类号：

摘要：

Ozren Bogdanović, Ryan Lister, José Luis Gómez-Skarmeta, Michiel Vermeulen and colleagues report widespread DNA demethylation at developmental enhancers during the phylotypic period in zebrafish, Xenopus and mouse embryos. Their findings suggest a conserved role for Tet proteins and active DNA demethylation in the regulation of phylotypic enhancers.

引用

页码：417 / 426

页数：9

共 50 条

[1] Active DNA demethylation at enhancers during the vertebrate phylotypic period
Bogdanovic, Ozren
Smits, Arne H.
de la Calle Mustienes, Elisa
Tena, Juan J.
Ford, Ethan
Williams, Ruth
Senanayake, Upeka
Schultz, Matthew D.
Hontelez, Saartje
van Kruijsbergen, Ila
Rayon, Teresa
Gnerlich, Felix
Carell, Thomas
Veenstra, Gert Jan C.
Manzanares, Miguel
Sauka-Spengler, Tatjana
Ecker, Joseph R.
Vermeulen, Michiel
Luis Gomez-Skarmeta, Jose
Lister, Ryan
[J]. NATURE GENETICS, 2016, 48 (04) : 417 - +
[2] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis
Irie, Naoki
Kuratani, Shigeru
[J]. NATURE COMMUNICATIONS, 2011, 2
[3] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis
Naoki Irie
Shigeru Kuratani
[J]. Nature Communications, 2
[4] Molecular signaling in zebrafish development and the vertebrate phylotypic period
Comte, Aurelie
Roux, Julien
Robinson-Rechavi, Marc
[J]. EVOLUTION & DEVELOPMENT, 2010, 12 (02) : 144 - 156
[5] Erratum: Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis
Naoki Irie
Shigeru Kuratani
[J]. Nature Communications, 5
[6] Active DNA demethylation of the vertebrate genomes by DNA methyltransferases: deaminase, dehydroxymethylase or demethylase?
Wang, Keh-Yang
Chen, Chun-Chang
Shen, Che-Kun James
[J]. EPIGENOMICS, 2014, 6 (03) : 353 - 363
[7] Comparative epigenomics in distantly related teleost species identifies conserved cis-regulatory nodes active during the vertebrate phylotypic period
Tena, Juan J.
Gonzalez-Aguilera, Cristina
Fernandez-Minan, Ana
Vazquez-Marin, Javier
Parra-Acero, Helena
Cross, Joe W.
Rigby, Peter W. J.
Carvajal, Jaime J.
Wittbrodt, Joachim
Gomez-Skarmeta, Jose L.
Martinez-Morales, Juan R.
[J]. GENOME RESEARCH, 2014, 24 (07) : 1075 - 1085
[8] Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis (vol 2, 3366, 2011)
Irie, Naoki
Kuratani, Shigeru
[J]. NATURE COMMUNICATIONS, 2014, 5
[9] Active DNA demethylation of developmental cis-regulatory regions predates vertebrate origins
Skvortsova, Ksenia
Bertrand, Stephanie
Voronov, Danila
Duckett, Paul E.
Ross, Samuel E.
Magri, Marta Silvia
Maeso, Ignacio
Weatheritt, Robert J.
Skarmeta, Jose Luis Gomez
Arnone, Maria Ina
Escriva, Hector
Bogdanovic, Ozren
[J]. SCIENCE ADVANCES, 2022, 8 (48):
[10] Active DNA demethylation and DNA repair
Niehrs, Christof
[J]. DIFFERENTIATION, 2009, 77 (01) : 1 - 11

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