MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs

被引：0
|
作者：
Mamoru Kato
Tatsuhiko Tsunoda
机构：
[1] RIKEN,Laboratory for Medical Informatics, SNP Research Center
来源：
BMC Bioinformatics | / 8卷
关键词：
Input Sequence; Multivariate Linear Regression; Upstream Sequence; Multivariate Adaptive Regression Spline; Single Motif;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 50 条
  • [21] FastBill: An Improved Tool for Prediction of Cis-Regulatory Modules
    Wilczynski, Bartek
    Tiuryn, Jerzy
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2017, 24 (03) : 193 - 199
  • [22] jPREdictor:: a versatile tool for the prediction of cis-regulatory elements
    Fiedler, Thomas
    Rehmsmeier, Marc
    NUCLEIC ACIDS RESEARCH, 2006, 34 : W546 - W550
  • [23] ExactSearch: a web-based plant motif search tool
    Chathura Gunasekara
    Avinash Subramanian
    Janaki Venkata Ram Kumar Avvari
    Bin Li
    Su Chen
    Hairong Wei
    Plant Methods, 12
  • [24] ExactSearch: a web-based plant motif search tool
    Gunasekara, Chathura
    Subramanian, Avinash
    Avvari, Janaki Venkata Ram Kumar
    Li, Bin
    Chen, Su
    Wei, Hairong
    PLANT METHODS, 2016, 12
  • [25] Divergent combinations of cis-regulatory elements control the evolution of phenotypic plasticity
    Dardiry, Mohannad
    Eberhard, Gabi W.
    Witte, Hanh J.
    Roedelsperger, Christian
    Lightfoot, James
    Sommer, Ralf
    PLOS BIOLOGY, 2023, 21 (08)
  • [26] Protein sequence search tool: A web-based interactive search engine
    Saravanan, S
    Khan, AA
    Sekar, K
    CURRENT SCIENCE, 2000, 78 (05): : 550 - 552
  • [27] Condition-specific coregulation with cis-regulatory motifs and modules in the mouse genome
    Choi, D
    Fang, YA
    Mathers, WD
    GENOMICS, 2006, 87 (04) : 500 - 508
  • [28] Analysis of Cis-Regulatory Motifs in Cassette Exons by Incorporating Exon Skipping Rates
    Zhao, Sihui
    Kim, Jihye
    Heber, Steffen
    BIOINFORMATICS RESEARCH AND APPLICATIONS: 5TH INTERNATIONAL SYMPOSIUM, ISBRA 2009, 2009, 5542 : 272 - 283
  • [29] An integrated toolkit for accurate prediction and analysis of cis-regulatory motifs at a genome scale
    Ma, Qin
    Liu, Bingqiang
    Zhou, Chuan
    Yin, Yanbin
    Li, Guojun
    Xu, Ying
    BIOINFORMATICS, 2013, 29 (18) : 2261 - 2268
  • [30] Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing
    Kim, Jihye
    Zhao, Sihui
    Howard, Brian E.
    Heber, Steffen
    BIOINFORMATICS RESEARCH AND APPLICATIONS: 5TH INTERNATIONAL SYMPOSIUM, ISBRA 2009, 2009, 5542 : 260 - 271
12345