Evolutionary rate depends on number of protein-protein interactions independently of gene expression level: Response

被引:0
|
作者
Jesse D Bloom
Christoph Adami
机构
[1] California Institute of Technology,Department of Chemistry and Digital Life Laboratory
[2] California Institute of Technology,Digital Life Laboratory
[3] Keck Graduate Institute,undefined
来源
关键词
Evolutionary Rate; Interaction Partner; Evolutionary Constraint; Codon Adaptation Index; Significant Partial Correlation;
D O I
暂无
中图分类号
学科分类号
摘要
A response to Fraser HB, Hirsh AE: Evolutionary rate depends on number of protein-protein interactions independently of gene expression level.BMC Evol Biol 2004, 4: 13
引用
收藏
相关论文
共 50 条
  • [41] Identifying Protein-Protein Interactions in Single Protein Complex level by Microchannel Device
    Chou, Chao-Kai
    Jing, Nan
    Yamaguchi, Hirohito
    Tsou, Pei-Hsiang
    Kameoka, Jun
    Hung, Mien-Chie
    CANCER RESEARCH, 2010, 70
  • [42] Reporter gene imaging of protein-protein interactions in living subjects
    Massoud, Tarik F.
    Paulmurugan, Rarnasarny
    De, Abhijit
    Ray, Pritha
    Garnbhir, Sanjiv S.
    CURRENT OPINION IN BIOTECHNOLOGY, 2007, 18 (01) : 31 - 37
  • [43] Determining the minimum number of protein-protein interactions required to support known protein complexes
    Nakajima, Natsu
    Hayashida, Morihiro
    Jansson, Jesper
    Maruyama, Osamu
    Akutsu, Tatsuya
    PLOS ONE, 2018, 13 (04):
  • [44] Predicting Protein-Protein Interactions via Random Ferns with Evolutionary Matrix Representation
    Li, Yang
    Wang, Zheng
    You, Zhu-Hong
    Li, Li-Ping
    Hu, Xuegang
    COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE, 2022, 2022
  • [45] Evolutionary features of ligands and their receptors via protein-protein interactions and essentiality in primates
    Mawaribuchi, Shuuji
    Haramoto, Yoshikazu
    Ikeda, Nozomi
    Ito, Michihiko
    GENES TO CELLS, 2023, 28 (04) : 258 - 266
  • [46] SPECIFICITY OF HOX PROTEIN FUNCTION DEPENDS ON DNA-PROTEIN AND PROTEIN-PROTEIN INTERACTIONS, BOTH MEDIATED BY THE HOMEO DOMAIN
    ZAPPAVIGNA, V
    SARTORI, D
    MAVILIO, F
    GENES & DEVELOPMENT, 1994, 8 (06) : 732 - 744
  • [47] Atomic-level evolutionary information improves protein-protein interface scoring
    Quignot, Chloe
    Granger, Pierre
    Chacon, Pablo
    Guerois, Raphael
    Andreani, Jessica
    BIOINFORMATICS, 2021, 37 (19) : 3175 - 3181
  • [48] A highly efficient transient protoplast system for analyzing defence gene expression and protein-protein interactions in rice
    Chen, Songbiao
    Tao, Lizen
    Zeng, Lirong
    Vega-Sanchez, Miguel E.
    Umemura, Kenji
    Wang, Guo-Liang
    MOLECULAR PLANT PATHOLOGY, 2006, 7 (05) : 417 - 427
  • [49] No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly
    I King Jordan
    Yuri I Wolf
    Eugene V Koonin
    BMC Evolutionary Biology, 3
  • [50] Associations between HIV and Human Pathways Revealed by Protein-Protein Interactions and Correlated Gene Expression Profiles
    Chen, Kuang-Chi
    Wang, Tse-Yi
    Chan, Chen-Hsiung
    PLOS ONE, 2012, 7 (03):