An analytic and systematic framework for estimating metabolic flux ratios from 13C tracer experiments

被引:0
|
作者
Ari Rantanen
Juho Rousu
Paula Jouhten
Nicola Zamboni
Hannu Maaheimo
Esko Ukkonen
机构
[1] University of Helsinki,Department of Computer Science
[2] ETH Zurich,Institute of Molecular Systems Biology
[3] VTT Technical Research Centre of Finland,undefined
来源
关键词
Metabolic Network; Metabolic Flux; Flux Distribution; Flux Ratio; Flux Balance Analysis;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] 13C metabolic flux analysis of recombinant expression hosts
    Young, Jamey D.
    CURRENT OPINION IN BIOTECHNOLOGY, 2014, 30 : 238 - 245
  • [22] 13C Metabolic flux analysis at the genome-scale
    Gopalakrishnan, Saratram
    Maranas, Costas
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2015, 249
  • [23] High-resolution 13C metabolic flux analysis
    Christopher P. Long
    Maciek R. Antoniewicz
    Nature Protocols, 2019, 14 : 2856 - 2877
  • [24] Enhanced benthic activity in sandy sublittoral sediments:: Evidence from 13C tracer experiments
    Buhring, S. I.
    Ehrenhauss, S.
    Kamp, A.
    Moodley, L.
    Witte, U.
    MARINE BIOLOGY RESEARCH, 2006, 2 (02) : 120 - 129
  • [25] p13CMFA: Parsimonious 13C metabolic flux analysis
    Foguet, Carles
    Jayaraman, Anusha
    Marin, Silvia
    Selivanov, Vitaly A.
    Moreno, Pablo
    Messeguer, Ramon
    de Atauri, Pedro
    Cascante, Marta
    PLOS COMPUTATIONAL BIOLOGY, 2019, 15 (09)
  • [26] Synergizing 13C Metabolic Flux Analysis and Metabolic Engineering for Biochemical Production
    Guo, Weihua
    Sheng, Jiayuan
    Feng, Xueyang
    SYNTHETIC BIOLOGY - METABOLIC ENGINEERING, 2018, 162 : 265 - 299
  • [27] Metabolic analysis of butanol production from acetate in Clostridium saccharoperbutylacetonicum N1-4 using 13C tracer experiments
    Gao, Ming
    Tashiro, Yukihiro
    Yoshida, Tsuyoshi
    Zheng, Jin
    Wang, Qunhui
    Sakai, Kenji
    Sonomoto, Kenji
    RSC ADVANCES, 2015, 5 (11): : 8486 - 8495
  • [28] Metabolite channeling and compartmentation in the human cell line AGE1.HN determined by 13C labeling experiments and 13C metabolic flux analysis
    Niklas, Jens
    Sandig, Volker
    Heinzle, Elmar
    JOURNAL OF BIOSCIENCE AND BIOENGINEERING, 2011, 112 (06) : 616 - 623
  • [29] Parallel labeling experiments with [U-13C]glucose validate E. coli metabolic network model for 13C metabolic flux analysis
    Leighty, Robert W.
    Antoniewicz, Maciek R.
    METABOLIC ENGINEERING, 2012, 14 (05) : 533 - 541
  • [30] Tandem Mass Spectrometry for 13C Metabolic Flux Analysis: Methods and Algorithms Based on EMU Framework
    Choi, Jungik
    Antoniewicz, Maciek R.
    FRONTIERS IN MICROBIOLOGY, 2019, 10