Structural mechanism of GTPase-powered ribosome-tRNA movement

被引:0
|
作者
Valentyn Petrychenko
Bee-Zen Peng
Ana C. de A. P. Schwarzer
Frank Peske
Marina V. Rodnina
Niels Fischer
机构
[1] Max Planck Institute for Biophysical Chemistry,Department of Structural Dynamics
[2] Max Planck Institute for Biophysical Chemistry,Department of Physical Biochemistry
[3] University Medical Center Göttingen,Department of Molecular Biology
来源
关键词
D O I
暂无
中图分类号
学科分类号
摘要
GTPases are regulators of cell signaling acting as molecular switches. The translational GTPase EF-G stands out, as it uses GTP hydrolysis to generate force and promote the movement of the ribosome along the mRNA. The key unresolved question is how GTP hydrolysis drives molecular movement. Here, we visualize the GTPase-powered step of ongoing translocation by time-resolved cryo-EM. EF-G in the active GDP–Pi form stabilizes the rotated conformation of ribosomal subunits and induces twisting of the sarcin-ricin loop of the 23 S rRNA. Refolding of the GTPase switch regions upon Pi release initiates a large-scale rigid-body rotation of EF-G pivoting around the sarcin-ricin loop that facilitates back rotation of the ribosomal subunits and forward swiveling of the head domain of the small subunit, ultimately driving tRNA forward movement. The findings demonstrate how a GTPase orchestrates spontaneous thermal fluctuations of a large RNA-protein complex into force-generating molecular movement.
引用
收藏
相关论文
共 50 条
  • [1] Structural mechanism of GTPase-powered ribosome-tRNA movement
    Petrychenko, Valentyn
    Peng, Bee-Zen
    Schwarzer, Ana C. de A. P.
    Peske, Frank
    Rodnina, Marina V.
    Fischer, Niels
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2021, 50 (SUPPL 1): : 62 - 62
  • [2] Structural mechanism of GTPase-powered ribosome-tRNA movement
    Petrychenko, Valentyn
    Peng, Bee-Zen
    de A. P. Schwarzer, Ana C.
    Peske, Frank
    Rodnina, Marina V.
    Fischer, Niels
    NATURE COMMUNICATIONS, 2021, 12 (01)
  • [3] An orthogonal ribosome-tRNA pair via engineering of the peptidyl transferase center
    Terasaka N.
    Hayashi G.
    Katoh T.
    Suga H.
    Nature Chemical Biology, 2014, 10 (7) : 555 - 557
  • [4] An orthogonal ribosome-tRNA pair via engineering of the peptidyl transferase center
    Terasaka, Naohiro
    Hayashi, Gosuke
    Katoh, Takayuki
    Suga, Hiroaki
    NATURE CHEMICAL BIOLOGY, 2014, 10 (07) : 555 - 557
  • [6] The movement of tRNA through the ribosome
    Frank, J
    Agrawal, RK
    BIOPHYSICAL JOURNAL, 1998, 74 (01) : 589 - 594
  • [7] The ribosome as a molecular machine: the mechanism of tRNA-mRNA movement in translocation
    Rodnina, Marina V.
    Wintermeyer, Wolfgang
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2011, 39 : 658 - 662
  • [8] Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations
    Svidritskiy, Egor
    Brilot, Axel F.
    Koh, Cha San
    Grigorieff, Nikolaus
    Korostelev, Andrei A.
    STRUCTURE, 2014, 22 (08) : 1210 - 1218
  • [9] Mechanism of tRNA translocation on the ribosome
    Rodnina, MV
    Semenkov, YP
    Savelsbergh, A
    Katunin, VI
    Peske, F
    Wilden, B
    Wintermeyer, W
    MOLECULAR BIOLOGY, 2001, 35 (04) : 559 - 568
  • [10] EttA regulates translation by binding the ribosomal E site and restricting ribosome-tRNA dynamics
    Bo Chen
    Grégory Boël
    Yaser Hashem
    Wei Ning
    Jingyi Fei
    Chi Wang
    Ruben L Gonzalez
    John F Hunt
    Joachim Frank
    Nature Structural & Molecular Biology, 2014, 21 : 152 - 159