Recent progress in atomistic modeling of light-harvesting complexes: a mini review

被引:0
|
作者
Sayan Maity
Ulrich Kleinekathöfer
机构
[1] Jacobs University Bremen,Department of Physics and Earth Sciences
来源
Photosynthesis Research | 2023年 / 156卷
关键词
Multiscale modeling; Light-harvesting complexes; QM/MM simulations; Excited state calculations; Spectral densities; Exciton dynamics;
D O I
暂无
中图分类号
学科分类号
摘要
In this mini review, we focus on recent advances in the atomistic modeling of biological light-harvesting (LH) complexes. Because of their size and sophisticated electronic structures, multiscale methods are required to investigate the dynamical and spectroscopic properties of such complexes. The excitation energies, in this context also known as site energies, excitonic couplings, and spectral densities are key quantities which usually need to be extracted to be able to determine the exciton dynamics and spectroscopic properties. The recently developed multiscale approach based on the numerically efficient density functional tight-binding framework followed by excited state calculations has been shown to be superior to the scheme based on pure classical molecular dynamics simulations. The enhanced approach, which improves the description of the internal vibrational dynamics of the pigment molecules, yields spectral densities in good agreement with the experimental counterparts for various bacterial and plant LH systems. Here, we provide a brief overview of those results and described the theoretical foundation of the multiscale protocol.
引用
收藏
页码:147 / 162
页数:15
相关论文
共 50 条
  • [21] Superradiance Transition in Photosynthetic Light-Harvesting Complexes
    Celardo, Giuseppe L.
    Borgonovi, Fausto
    Merkli, Marco
    Tsifrinovich, Vladimir I.
    Berman, Gennady P.
    JOURNAL OF PHYSICAL CHEMISTRY C, 2012, 116 (42): : 22105 - 22111
  • [22] Identifying the quantum correlations in light-harvesting complexes
    Bradler, Kamil
    Wilde, Mark M.
    Vinjanampathy, Sai
    Uskov, Dmitry B.
    PHYSICAL REVIEW A, 2010, 82 (06):
  • [23] PROTEIN ENGINEERING OF BACTERIAL LIGHT-HARVESTING COMPLEXES
    HUNTER, CN
    FOWLER, GJS
    GRIEF, GG
    OLSEN, JD
    JONES, MR
    BIOCHEMICAL SOCIETY TRANSACTIONS, 1993, 21 (01) : 41 - 43
  • [24] STRUCTURE AND FUNCTION OF BACTERIAL LIGHT-HARVESTING COMPLEXES
    KUHLBRANDT, W
    STRUCTURE, 1995, 3 (06) : 521 - 525
  • [26] Quantum entanglement in photosynthetic light-harvesting complexes
    Sarovar, Mohan
    Ishizaki, Akihito
    Fleming, Graham R.
    Whaley, K. Birgitta
    NATURE PHYSICS, 2010, 6 (06) : 462 - 467
  • [27] Excitations and excitons in bacterial light-harvesting complexes
    Monshouwer, R
    vanGrondelle, R
    BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 1996, 1275 (1-2): : 70 - 75
  • [28] PURPLE-BACTERIAL LIGHT-HARVESTING COMPLEXES
    COGDELL, RJ
    BIOCHEMICAL SOCIETY TRANSACTIONS, 1986, 14 (01) : 4 - 5
  • [29] Delocalized excitons in natural light-harvesting complexes
    Jang, Seogjoo J.
    Mennucci, Benedetta
    REVIEWS OF MODERN PHYSICS, 2018, 90 (03)
  • [30] The molecular mechanisms of light adaption in light-harvesting complexes of purple bacteria revealed by a multiscale modeling
    Ramos, Felipe Cardoso
    Nottoli, Michele
    Cupellini, Lorenzo
    Mennucci, Benedetta
    CHEMICAL SCIENCE, 2019, 10 (42) : 9650 - 9662