Genome sequence of the human malaria parasite Plasmodium falciparum

被引:0
|
作者
Malcolm J. Gardner
Neil Hall
Eula Fung
Owen White
Matthew Berriman
Richard W. Hyman
Jane M. Carlton
Arnab Pain
Karen E. Nelson
Sharen Bowman
Ian T. Paulsen
Keith James
Jonathan A. Eisen
Kim Rutherford
Steven L. Salzberg
Alister Craig
Sue Kyes
Man-Suen Chan
Vishvanath Nene
Shamira J. Shallom
Bernard Suh
Jeremy Peterson
Sam Angiuoli
Mihaela Pertea
Jonathan Allen
Jeremy Selengut
Daniel Haft
Michael W. Mather
Akhil B. Vaidya
David M. A. Martin
Alan H. Fairlamb
Martin J. Fraunholz
David S. Roos
Stuart A. Ralph
Geoffrey I. McFadden
Leda M. Cummings
G. Mani Subramanian
Chris Mungall
J. Craig Venter
Daniel J. Carucci
Stephen L. Hoffman
Chris Newbold
Ronald W. Davis
Claire M. Fraser
Bart Barrell
机构
[1] The Institute for Genomic Research,Department of Microbiology and Immunology
[2] The Wellcome Trust Sanger Institute,School of Life Sciences, The Wellcome Trust Biocentre
[3] The Wellcome Trust Genome Campus,Department of Biology and Genomics Institute
[4] Stanford Genome Technology Center,Plant Cell Biology Research Centre, School of Botany
[5] Liverpool School of Tropical Medicine,Department of Molecular and Cellular Biology, Berkeley Drosophila Genome Project
[6] Pembroke Place,undefined
[7] University of Oxford,undefined
[8] Weatherall Institute of Molecular Medicine,undefined
[9] John Radcliffe Hospital,undefined
[10] Drexel University College of Medicine,undefined
[11] The University of Dundee,undefined
[12] University of Pennsylvania,undefined
[13] University of Melbourne,undefined
[14] Celera Genomics,undefined
[15] University of California,undefined
[16] The Center for the Advancement of Genomics,undefined
[17] Malaria Program,undefined
[18] Naval Medical Research Center,undefined
[19] Syngenta,undefined
[20] Jealott's Hill International Research Centre,undefined
[21] Sanaria,undefined
来源
Nature | 2002年 / 419卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
The parasite Plasmodium falciparum is responsible for hundreds of millions of cases of malaria, and kills more than one million African children annually. Here we report an analysis of the genome sequence of P. falciparum clone 3D7. The 23-megabase nuclear genome consists of 14 chromosomes, encodes about 5,300 genes, and is the most (A + T)-rich genome sequenced to date. Genes involved in antigenic variation are concentrated in the subtelomeric regions of the chromosomes. Compared to the genomes of free-living eukaryotic microbes, the genome of this intracellular parasite encodes fewer enzymes and transporters, but a large proportion of genes are devoted to immune evasion and host–parasite interactions. Many nuclear-encoded proteins are targeted to the apicoplast, an organelle involved in fatty-acid and isoprenoid metabolism. The genome sequence provides the foundation for future studies of this organism, and is being exploited in the search for new drugs and vaccines to fight malaria.
引用
收藏
页码:498 / 511
页数:13
相关论文
共 50 条
  • [1] Genome sequence of the human malaria parasite Plasmodium falciparum
    Gardner, MJ
    Hall, N
    Fung, E
    White, O
    Berriman, M
    Hyman, RW
    Carlton, JM
    Pain, A
    Nelson, KE
    Bowman, S
    Paulsen, IT
    James, K
    Eisen, JA
    Rutherford, K
    Salzberg, SL
    Craig, A
    Kyes, S
    Chan, MS
    Nene, V
    Shallom, SJ
    Suh, B
    Peterson, J
    Angiuoli, S
    Pertea, M
    Allen, J
    Selengut, J
    Haft, D
    Mather, MW
    Vaidya, AB
    Martin, DMA
    Fairlamb, AH
    Fraunholz, MJ
    Roos, DS
    Ralph, SA
    McFadden, GI
    Cummings, LM
    Subramanian, GM
    Mungall, C
    Venter, JC
    Carucci, DJ
    Hoffman, SL
    Newbold, C
    Davis, RW
    Fraser, CM
    Barrell, B
    [J]. NATURE, 2002, 419 (6906) : 498 - 511
  • [2] Characterization of the accessible genome in the human malaria parasite Plasmodium falciparum
    Luis Ruiz, Jose
    Tena, Juan J.
    Bancells, Cristina
    Cortes, Alfred
    Luis Gomez-Skarmeta, Jose
    Gomez-Diaz, Elena
    [J]. NUCLEIC ACIDS RESEARCH, 2018, 46 (18) : 9414 - 9431
  • [3] Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum
    Gardner, MJ
    Tettelin, H
    Carucci, DJ
    Cummings, LM
    Aravind, L
    Koonin, EV
    Shallom, S
    Mason, T
    Yu, K
    Fujii, C
    Pederson, J
    Shen, K
    Jing, JP
    Aston, C
    Lai, ZW
    Schwartz, DC
    Pertea, M
    Salzberg, S
    Zhou, LX
    Sutton, GG
    Clayton, R
    White, O
    Smith, HO
    Fraser, CM
    Adams, MD
    Venter, JC
    Hoffman, SL
    [J]. SCIENCE, 1998, 282 (5391) : 1126 - 1132
  • [4] Genome variation and evolution of the malaria parasite Plasmodium falciparum
    Jeffares, Daniel C.
    Pain, Arnab
    Berry, Andrew
    Cox, Anthony V.
    Stalker, James
    Ingle, Catherine E.
    Thomas, Alan
    Quail, Michael A.
    Siebenthall, Kyle
    Uhlemann, Anne-Catrin
    Kyes, Sue
    Krishna, Sanjeev
    Newbold, Chris
    Dermitzakis, Emmanouil T.
    Berriman, Matthew
    [J]. NATURE GENETICS, 2007, 39 (01) : 120 - 125
  • [5] Genome variation and evolution of the malaria parasite Plasmodium falciparum
    Daniel C Jeffares
    Arnab Pain
    Andrew Berry
    Anthony V Cox
    James Stalker
    Catherine E Ingle
    Alan Thomas
    Michael A Quail
    Kyle Siebenthall
    Anne-Catrin Uhlemann
    Sue Kyes
    Sanjeev Krishna
    Chris Newbold
    Emmanouil T Dermitzakis
    Matthew Berriman
    [J]. Nature Genetics, 2007, 39 : 120 - 125
  • [6] Mitosis in the Human Malaria Parasite Plasmodium falciparum
    Gerald, Noel
    Mahajan, Babita
    Kumar, Sanjai
    [J]. EUKARYOTIC CELL, 2011, 10 (04) : 474 - 482
  • [7] Proteomics of the human malaria parasite Plasmodium falciparum
    Sims, Paul F. G.
    Hyde, John E.
    [J]. EXPERT REVIEW OF PROTEOMICS, 2006, 3 (01) : 87 - 95
  • [8] Source of the human malaria parasite Plasmodium falciparum
    Sharp, Paul M.
    Liu, Weimin
    Learn, Gerald H.
    Rayner, Julian C.
    Peeters, Martine
    Hahn, Beatrice H.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (38) : E744 - E745
  • [9] Transfection of the human malaria parasite Plasmodium falciparum
    Waterkeyn, JG
    Crabb, BS
    Cowman, AF
    [J]. INTERNATIONAL JOURNAL FOR PARASITOLOGY, 1999, 29 (06) : 945 - 955
  • [10] Sequence-dependent heterochromatin formation in the human malaria parasite Plasmodium falciparum
    Mori, Toshiyuki
    Nakashima, Mai
    [J]. HELIYON, 2023, 9 (09)