Towards a complete map of the human long non-coding RNA transcriptome

被引:0
|
作者
Barbara Uszczynska-Ratajczak
Julien Lagarde
Adam Frankish
Roderic Guigó
Rory Johnson
机构
[1] University of Warsaw,Centre of New Technologies
[2] The Barcelona Institute of Science and Technology,Centre for Genomic Regulation (CRG)
[3] Universitat Pompeu Fabra (UPF),European Molecular Biology Laboratory
[4] European Bioinformatics Institute,Department of Medical Oncology, Inselspital
[5] Wellcome Genome Campus,Department of Biomedical Research (DBMR)
[6] University Hospital and University of Bern,undefined
[7] University of Bern,undefined
来源
Nature Reviews Genetics | 2018年 / 19卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
Gene maps, or annotations, enable us to navigate the functional landscape of our genome. They are a resource upon which virtually all studies depend, from single-gene to genome-wide scales and from basic molecular biology to medical genetics. Yet present-day annotations suffer from trade-offs between quality and size, with serious but often unappreciated consequences for downstream studies. This is particularly true for long non-coding RNAs (lncRNAs), which are poorly characterized compared to protein-coding genes. Long-read sequencing technologies promise to improve current annotations, paving the way towards a complete annotation of lncRNAs expressed throughout a human lifetime.
引用
收藏
页码:535 / 548
页数:13
相关论文
共 50 条
  • [31] HULC: an oncogenic long non-coding RNA in human cancer
    Yu, Xin
    Zheng, Heyi
    Chan, Matthew T. V.
    Wu, William Ka Kei
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2017, 21 (02) : 410 - 417
  • [32] Long non-coding RNA and cancer
    Diederichs, S.
    EUROPEAN JOURNAL OF CANCER, 2014, 50 : S13 - S13
  • [33] Long Non-coding RNA RMRP in the Pathogenesis of Human Disorders
    Hussen, Bashdar Mahmud
    Azimi, Tahereh
    Hidayat, Hazha Jamal
    Taheri, Mohammad
    Ghafouri-Fard, Soudeh
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [34] Long non-coding RNA stability
    Hannah Stower
    Nature Reviews Genetics, 2012, 13 (5) : 298 - 298
  • [35] Coding non-coding human telomerase RNA
    Naraykina, Y.
    Rubtsova, M.
    Vasilkova, D.
    Meerson, M.
    Zvereva, M.
    Lazarev, V.
    Manuvera, V.
    Kovalchuk, S.
    Anikanov, N.
    Butenko, I.
    Pobeguts, O.
    Govorun, V.
    Dontsova, O.
    FEBS JOURNAL, 2017, 284 : 13 - 13
  • [36] The non-coding transcriptome of hypoxic breast cancer: Novel insights of clinical relevant long non-coding RNA in hypoxia signalling
    Choudhry, Hani
    Schodel, Johannes
    Albukhari, Ashwag
    Haider, Syed
    Buffa, Francesca
    Ratcliffe, Peter J.
    Mole, David R.
    Ragousis, Ioannis
    Harris, Adrian L.
    CANCER RESEARCH, 2015, 75
  • [37] Long non-coding RNA modifies chromatin Epigenetic silencing by long non-coding RNAs
    Saxena, Alka
    Carninci, Piero
    BIOESSAYS, 2011, 33 (11) : 830 - 839
  • [38] Characterization of the Myometrial Transcriptome of Long Non-coding RNA Genes in Human Labor by High-Throughput RNA-seq
    Luo, Yihong
    Cui, Long
    Chen, Lina
    Wang, Lele
    Ji, Kaiyuan
    Liu, Huishu
    REPRODUCTIVE SCIENCES, 2022, 29 (10) : 2885 - 2893
  • [39] Characterization of the Myometrial Transcriptome of Long Non-coding RNA Genes in Human Labor by High-Throughput RNA-seq
    Yihong Luo
    Long Cui
    Lina Chen
    Lele Wang
    Kaiyuan Ji
    Huishu Liu
    Reproductive Sciences, 2022, 29 : 2885 - 2893
  • [40] Regulation of the Long Non-coding RNA Transcriptome in Endothelial Cells in Response to Shear Stress
    Sukumar, Aravin N.
    Man, H. S.
    Dubinsky, Michelle K.
    Turgeon, Paul J.
    Ku, Kyung H.
    Teitelbaum, Daniel
    Lee, Mike K.
    Marsden, Philip A.
    ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY, 2019, 39