Spatial-temporal Bayesian accelerated failure time models for survival endpoints with applications to prostate cancer registry data

被引:0
|
作者
Wang, Ming [1 ]
Li, Zheng [2 ]
Lu, Jun [3 ]
Zhang, Lijun [1 ]
Li, Yimei [4 ]
Zhang, Liangliang [1 ]
机构
[1] Case Western Reserve Univ, Dept Populat & Quantitat Hlth Sci, Cleveland, OH 44106 USA
[2] Novartis Pharmaceut, E Hanover, NJ USA
[3] Univ Illinois, Sch Publ Hlth, Div Epidemiol & Biostat, Chicago, IL USA
[4] Univ Penn, Dept Biostat Epidemiol & Informat, Philadelphia, PA USA
关键词
Accelerated failure times; Bayesian inference; Monte Carlo Markov chain; Multivariate conditional autoregressive priors; Prostate cancer; Spatial-temporal modeling; PENNSYLVANIA; APPALACHIA;
D O I
10.1186/s12874-024-02201-w
中图分类号
R19 [保健组织与事业(卫生事业管理)];
学科分类号
摘要
Prostate cancer is the most common cancer after non-melanoma skin cancer and the second leading cause of cancer deaths in US men. Its incidence and mortality rates vary substantially across geographical regions and over time, with large disparities by race, geographic regions (i.e., Appalachia), among others. The widely used Cox proportional hazards model is usually not applicable in such scenarios owing to the violation of the proportional hazards assumption. In this paper, we fit Bayesian accelerated failure time models for the analysis of prostate cancer survival and take dependent spatial structures and temporal information into account by incorporating random effects with multivariate conditional autoregressive priors. In particular, we relax the proportional hazards assumption, consider flexible frailty structures in space and time, and also explore strategies for handling the temporal variable. The parameter estimation and inference are based on a Monte Carlo Markov chain technique under a Bayesian framework. The deviance information criterion is used to check goodness of fit and to select the best candidate model. Extensive simulations are performed to examine and compare the performances of models in different contexts. Finally, we illustrate our approach by using the 2004-2014 Pennsylvania Prostate Cancer Registry data to explore spatial-temporal heterogeneity in overall survival and identify significant risk factors.
引用
收藏
页数:13
相关论文
共 39 条
  • [31] Subsampling approach for least squares fitting of semi-parametric accelerated failure time models to massive survival data
    Yang, Zehan
    Wang, HaiYing
    Yan, Jun
    STATISTICS AND COMPUTING, 2024, 34 (02)
  • [32] Subsampling approach for least squares fitting of semi-parametric accelerated failure time models to massive survival data
    Zehan Yang
    HaiYing Wang
    Jun Yan
    Statistics and Computing, 2024, 34
  • [33] Models of Temporal Enhanced Ultrasound Data for Prostate Cancer Diagnosis: The Impact of Time-Series Order
    Nahlawi, Layan
    Goncalves, Caroline
    Imani, Farhad
    Gaed, Mena
    Gomez, Jose A.
    Moussa, Madeleine
    Gibson, Eli
    Fenster, Aaron
    Ward, Aaron D.
    Abolmaesumi, Purang
    Mousavi, Parvin
    Shatkay, Hagit
    MEDICAL IMAGING 2017: IMAGE-GUIDED PROCEDURES, ROBOTIC INTERVENTIONS, AND MODELING, 2017, 10135
  • [34] Bayesian and frequentist approach for the generalized log-logistic accelerated failure time model with applications to larynx-cancer patients
    Muse, Abdisalam Hassan
    Mwalili, Samuel
    Ngesa, Oscar
    Alshanbari, Huda M.
    Khosa, Saima Khan
    Hussam, Eslam
    ALEXANDRIA ENGINEERING JOURNAL, 2022, 61 (10) : 7953 - 7978
  • [35] A Comparison between Accelerated Failure-time and Cox Proportional Hazard Models in Analyzing the Survival of Gastric Cancer Patients
    Zare, Ali
    Hosseini, Mostafa
    Mahmoodi, Mahmood
    Mohammad, Kazem
    Zeraati, Hojjat
    Holakouie Naieni, Kourosh
    IRANIAN JOURNAL OF PUBLIC HEALTH, 2015, 44 (08) : 1095 - 1102
  • [36] AFFECT: an R package for accelerated functional failure time model with error-contaminated survival times and applications to gene expression data
    Chen, Li-Pang
    Huang, Hsiao-Ting
    BMC BIOINFORMATICS, 2024, 25 (01):
  • [37] Optimal subsampling for semi-parametric accelerated failure time models with massive survival data using a rank-based approach
    Yang, Zehan
    Wang, Haiying
    Yan, Jun
    STATISTICS IN MEDICINE, 2024, 43 (24) : 4650 - 4666
  • [38] Bayesian spatial models for voxel-wise prostate cancer classification using multi-parametric magnetic resonance imaging data
    Jin, Jin
    Zhang, Lin
    Leng, Ethan
    Metzger, Gregory J.
    Koopmeiners, Joseph S.
    STATISTICS IN MEDICINE, 2022, 41 (03) : 483 - 499
  • [39] Social and spatial disparities in individuals' mobility response time to COVID-19: A big data analysis incorporating changepoint detection and accelerated failure time models
    Zhang, Wenjia
    Wu, Yulin
    Deng, Guobang
    TRANSPORTATION RESEARCH PART A-POLICY AND PRACTICE, 2024, 184