Gamarada debralockiae gen. nov. sp. nov.—the genome of the most widespread Australian ericoid mycorrhizal fungus

被引:0
|
作者
David J. Midgley
Brodie Sutcliffe
Paul Greenfield
Nai Tran-Dinh
机构
[1] CSIRO,Department of Molecular Sciences
[2] Macquarie University,undefined
来源
Mycorrhiza | 2018年 / 28卷
关键词
Fungi; Ericaceae; Helotiales; Epacrid;
D O I
暂无
中图分类号
学科分类号
摘要
This study describes a novel ericoid mycorrhizal fungus (ErMF), Gamarada debralockiae Midgley and Tran-Dinh gen. nov. sp. nov. Additionally, catabolism was explored from a genomic perspective. The nuclear and mitochondrial genomes of G. debralockiae were sequenced. Morphological characteristics were assessed on various media. Catabolic genes of G. debralockiae were explored using SignalP and dbCAN. Phylogenetic comparisons were undertaken using Phylogeny.fr. The 58.5-Mbp draft genome of G. debralockiae contained 17,075 putative genes. The complete mitochondrial genome was 28,168 bp in length. In culture, G. debralockiae produces slow-growing non-sporulating colonies. Gamarada debralockiae has many putative secreted catabolic enzymes. Phylogeny indicated G. debralockiae was distinct from known ascomycetous ErMF: Pezoloma ericae, Meliniomyces spp., Oidiodendron spp., and Cairneyella variabilis. It is closely related to many undescribed plant root-associated fungi and its nearest described relative is Hyphodiscus brevicollaris. Gamarada debralockiae has been recovered from virtually all Australian ericoid mycorrhizal studies and biogeographic data suggests the taxon is widespread in Australia. Gamarada debralockiae has similar catabolic potential to C. variabilis and co-occurs with C. variabilis at Australian sites. Plants that host multiple ErMF may benefit from subtle differences in catabolism that improve access to nitrogen and phosphorus from within recalcitrant organic matter.
引用
收藏
页码:379 / 389
页数:10
相关论文
共 50 条
  • [41] Actinoalloteichus cyanogriseus gen. nov., sp nov.
    Tamura, T
    Liu, ZH
    Zhang, YM
    Hatano, K
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 : 1435 - 1440
  • [42] Multiverruca sinensis gen. nov., sp. nov., a thermotolerant fungus isolated from soil in China
    Wang, Hai-Yan
    Zhang, Zhi-Yuan
    Ren, Yu-Lian
    Shao, Qiu-Yu
    Li, Xin
    Chen, Wan-Hao
    Liang, Jian-Dong
    Liang, Zong-Qi
    Han, Yan-Feng
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (02)
  • [43] Dethiobacter alkaliphilus gen. nov. sp. nov., and Desulfurivibrio alkaliphilus gen. nov. sp. nov.: two novel representatives of reductive sulfur cycle from soda lakes
    D. Yu. Sorokin
    T. P. Tourova
    Marc Mußmann
    G. Muyzer
    Extremophiles, 2008, 12 : 431 - 439
  • [44] New aerobic ammonium-dependent obligately oxalotrophic bacteria:: description of Ammoniphilus oxalaticus gen. nov., sp. nov. and Ammoniphilus oxalivorans gen. nov., sp. nov.
    Zaitsev, GM
    Tsitko, IV
    Rainey, FA
    Trotsenko, YA
    Uotila, JS
    Stackebrandt, E
    Salkinoja-Salonen, MS
    INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1998, 48 : 151 - 163
  • [45] Oryzihumus leptocrescens gen. nov., sp nov.
    Kageyama, A
    Takahashi, Y
    Seki, T
    Tomoda, H
    Omura, S
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2005, 55 : 2555 - 2559
  • [46] REVISION OF AUSTRALIAN SCIRTIDAE OF THE GENERA CHAMELOSCYPHON GEN. NOV., DAPLOEUROS GEN. NOV., DASYSCYPHON GEN. NOV., EURYCYPHON GEN. NOV., MACRODASCILLUS CARTER, PETROCYPHON GEN. NOV AND SPANIOSDASCILLUS GEN. NOV (COLEOPTERA)
    Watts, C. H. S.
    TRANSACTIONS OF THE ROYAL SOCIETY OF SOUTH AUSTRALIA, 2011, 135 : 66 - 110
  • [47] Description of Jidongwangia harbinensis gen. nov. sp. nov
    Han, Chuang
    Liu, Ting
    Guo, Lifeng
    Wang, Xiangjing
    Zhao, Junwei
    Xiang, Wensheng
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (01)
  • [48] Alkalimonas amylolytica gen. nov., sp. nov., and Alkalimonas delamerensis gen. nov., sp. nov., novel alkaliphilic bacteria from soda lakes in China and East Africa
    Yanhe Ma
    Yanfen Xue
    William D. Grant
    Nadine C. Collins
    Andrew W. Duckworth
    Robert P. van Steenbergen
    Brian E. Jones
    Extremophiles, 2004, 8 : 193 - 200
  • [49] New sequestrate fungi from Guyana: Jimtrappea guyanensis gen. sp. nov., Castellanea pakaraimophila gen. sp. nov., and Costatisporus cyanescens gen. sp. nov. (Boletaceae, Boletales)
    Matthew E. Smith
    Kevin R. Amses
    Todd F. Elliott
    Keisuke Obase
    M. Catherine Aime
    Terry W. Henkel
    IMA Fungus, 2015, 6 : 297 - 317
  • [50] Splendidivirga corallicola gen. nov., sp. nov. and Agaribacillus aureus gen. nov., sp. nov., two bacteria isolated from coral Porites lutea , and proposal of Splendidivirgaceae fam. nov.
    Li, Jin
    Luo, Jixin
    Li, Mi
    Wang, Chenyan
    Hu, Siyu
    Lu, Kun
    Wang, Guanghua
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2024, 74 (05)