Whole genome SNP genotype piecemeal imputation

被引:0
|
作者
Yining Wang
Tim Wylie
Paul Stothard
Guohui Lin
机构
[1] University of Alberta,Department of Computing Science
[2] University of Texas – Rio Grande Valley,Currently with Department of Computer Science
[3] University of Alberta,Department of Agricultural, Food, and Nutritional Science
来源
关键词
Single Nucleotide Polymorphism Genotype; Imputation Accuracy; Genotype Imputation; Density Single Nucleotide Polymorphism; Genotyped Animal;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [21] Whole genome–amplified DNA: insights and imputation
    Yik Y Teo
    Michael Inouye
    Kerrin S Small
    Andrew E Fry
    Simon C Potter
    Sarah J Dunstan
    Mark Seielstad
    Inês Barroso
    Nicholas J Wareham
    Kirk A Rockett
    Dominic P Kwiatkowski
    Panos Deloukas
    Nature Methods, 2008, 5 : 279 - 280
  • [22] Evaluation of a SNP-STR haplotype panel for forensic genotype imputation
    Chen, Ji
    Yang, Jiawen
    Li, Kai
    Ji, Qiang
    Kong, Xiaochao
    Xie, Sumei
    Zhan, Wenxuan
    Wu, Jiayi
    Huang, Shuainan
    Huang, Huijie
    Li, Rong
    Zhang, Zhiwei
    Cao, Yue
    Yu, Youjia
    Mao, Zhengsheng
    Yu, Yanfang
    Lv, Haiqin
    Pu, Yan
    Chen, Feng
    Chen, Peng
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2023, 62
  • [23] Genotype imputation for genome-wide association studies
    Marchini, Jonathan
    Howie, Bryan
    NATURE REVIEWS GENETICS, 2010, 11 (07) : 499 - 511
  • [24] Genotype imputation for genome-wide association studies
    Jonathan Marchini
    Bryan Howie
    Nature Reviews Genetics, 2010, 11 : 499 - 511
  • [25] Accurate genotype imputation from low-coverage whole-genome sequencing data of rainbow trout
    Liu, Sixin
    Martin, Kyle E.
    Snelling, Warren M.
    Long, Roseanna
    Leeds, Timothy D.
    Vallejo, Roger L.
    Wiens, Gregory D.
    Palti, Yniv
    G3-GENES GENOMES GENETICS, 2024, 14 (09):
  • [26] Impact of the inaccessible genome on genotype imputation and genome-wide association studies
    Koenig, Eva
    Mitchell, Jonathan Stewart
    Filosi, Michele
    Fuchsberger, Christian
    HUMAN MOLECULAR GENETICS, 2024, 33 (14) : 1207 - 1214
  • [27] Genotype imputation strategies for Portuguese Holstein cattle using different SNP panels
    Silva, Alessandra Alves
    Silva, Fabyano Fonseca
    Silva, Delvan Alves
    Silva, Hugo Teixeira
    Costa, Claudio Napolis
    Lopes, Paulo Savio
    Veroneze, Renata
    Thompson, Gertrude
    Carvalheira, Julio
    CZECH JOURNAL OF ANIMAL SCIENCE, 2019, 64 (09) : 377 - 386
  • [28] Validation of whole genome microarray SNP testing
    Tepperberg, J. H.
    Williford, B.
    Papenhausen, P. R.
    CYTOGENETIC AND GENOME RESEARCH, 2008, 121 (01)
  • [29] Accuracy of imputation to whole-genome sequence in sheep
    Sunduimijid Bolormaa
    Amanda J. Chamberlain
    Majid Khansefid
    Paul Stothard
    Andrew A. Swan
    Brett Mason
    Claire P. Prowse-Wilkins
    Naomi Duijvesteijn
    Nasir Moghaddar
    Julius H. van der Werf
    Hans D. Daetwyler
    Iona M. MacLeod
    Genetics Selection Evolution, 51
  • [30] Whole genome-amplified DNA: insights and imputation
    Teo, Yik Y.
    Inouye, Michael
    Small, Kerrin S.
    Fry, Andrew E.
    Potter, Simon C.
    Dunstan, Sarah J.
    Seielstad, Mark
    Barroso, Ines
    Wareham, Nicholas J.
    Rockett, Kirk A.
    Kwiatkowski, Dominic P.
    Deloukas, Panos
    NATURE METHODS, 2008, 5 (04) : 279 - 280