Construction of a genetic linkage map and mapping of drought tolerance trait in Indian beveragial tea

被引:0
|
作者
Sapinder Bali
Akshay Mamgain
Soom Nath Raina
Satish Kumar Yadava
Vishnu Bhat
Surdipta Das
Akshay Kumar Pradhan
Shailendra Goel
机构
[1] University of Delhi,Department of Botany
[2] Amity University,Amity Institute of Biotechnology
[3] University of Delhi South Campus,Centre for Genetic Manipulation of Crop Plants
[4] Tea Research Association,Plant Improvement Division, Department of Biotechnology
[5] University of Delhi South Campus,Department of Genetics
[6] Institute of Bioresources and Sustainable Development (IBSD),undefined
来源
Molecular Breeding | 2015年 / 35卷
关键词
AFLP; RAPD; Linkage map; species; Pseudo-testcross; Drought tolerance;
D O I
暂无
中图分类号
学科分类号
摘要
Tea is an important health drink which contributes significantly to the economy of Asian and African countries. India contributes about 29 % of the world’s total tea production where majority of the tea cultivated is Assam type (native to Assam, India). Apart from India, Assam type contributes to the majority of tea grown in tropical regions of Sri Lanka and Kenya as well. We have developed the first genetic linkage map in Indian beveragial tea using 234 DNA markers (AFLP and RAPD). The plausibility of the linkage group formation was compared using two-way pseudo-testcross approach (using maximum likelihood algorithm) and integrated approaches (using regression algorithm). Both the approaches generated linkage maps containing 18 linkage groups. The composition and order of markers in the corresponding linkage groups in both the maps showed significant congruence. Maximum likelihood algorithm could map 78.6 % of the markers with total map length of 8527.5 and 45.3 cM average distance between each marker. Regression algorithm could map 73.5 % of the total markers with total map length of 2051.7 and 14.96 cM average distance between each marker. Drought is the major abiotic stress responsible for heavy yield losses in cultivated tea all over the world. The present map was used to map the locus, AFLP_CS_87 that segregates with drought tolerance phenotype in both the maps.
引用
收藏
相关论文
共 50 条
  • [21] Constructing a genetic linkage map and mapping quantitative trait loci for skeletal traits in Japanese flounder
    Yi Liu
    Yongxin Liu
    Yingjie Liu
    Xiaoyan Zhang
    Fei Si
    Zhaohui Sun
    Guixing Wang
    Yufen Wang
    Runqing Yang
    Haijin Liu
    Biologia, 2013, 68 : 1221 - 1228
  • [22] Constructing a genetic linkage map and mapping quantitative trait loci for skeletal traits in Japanese flounder
    Liu, Yi
    Liu, Yongxin
    Liu, Yingjie
    Zhang, Xiaoyan
    Si, Fei
    Sun, Zhaohui
    Wang, Guixing
    Wang, Yufen
    Yang, Runqing
    Liu, Haijin
    BIOLOGIA, 2013, 68 (06) : 1221 - 1228
  • [23] High-density genetic map construction and QTL mapping of a zigzag-shaped stem trait in tea plant (Camellia sinensis)
    Liu, Dingding
    Ye, Yuanyuan
    Tang, Rongjin
    Gong, Yang
    Chen, Si
    Zhang, Chenyu
    Mei, Piao
    Chen, Jiedan
    Chen, Liang
    Ma, Chunlei
    BMC PLANT BIOLOGY, 2024, 24 (01)
  • [24] Construction of a genetic linkage map of Thlaspi caerulescens and quantitative trait loci analysis of zinc accumulation
    Assunçao, AGL
    Pieper, B
    Vromans, J
    Lindhout, P
    Aarts, MGM
    Schat, H
    NEW PHYTOLOGIST, 2006, 170 (01) : 21 - 32
  • [25] CONSTRUCTION OF A LINKAGE MAP OF THE HUMAN GENOME, AND ITS APPLICATION TO MAPPING GENETIC-DISEASES
    GREEN, P
    HELMS, C
    WEIFFENBACH, B
    STEPHENS, K
    KEITH, T
    BOWDEN, D
    SMITH, D
    DONISKELLER, H
    CLINICAL CHEMISTRY, 1989, 35 (7B) : B33 - B37
  • [26] Genetic dissection of maize drought tolerance for trait improvement
    Liu, Shengxue
    Qin, Feng
    MOLECULAR BREEDING, 2021, 41 (02)
  • [27] Genetic dissection of maize drought tolerance for trait improvement
    Shengxue Liu
    Feng Qin
    Molecular Breeding, 2021, 41
  • [28] Construction of a dense genetic linkage map and mapping quantitative trait loci for economic traits of a doubled haploid population of Pyropia haitanensis (Bangiales, Rhodophyta)
    Yan Xu
    Long Huang
    Dehua Ji
    Changsheng Chen
    Hongkun Zheng
    Chaotian Xie
    BMC Plant Biology, 15
  • [29] Construction of a dense genetic linkage map and mapping quantitative trait loci for economic traits of a doubled haploid population of Pyropia haitanensis (Bangiales, Rhodophyta)
    Xu, Yan
    Huang, Long
    Ji, Dehua
    Chen, Changsheng
    Zheng, Hongkun
    Xie, Chaotian
    BMC PLANT BIOLOGY, 2015, 15
  • [30] Genotyping by sequencing for the construction of oil palm (Elaeis guineensis Jacq.) genetic linkage map and mapping of yield related quantitative trait loci
    Shaha, Fakhrur Razi Mohd
    Liew, Pui Ling
    Zaman, Faridah Qamaruz
    Nulit, Rosimah
    Barin, Jakim
    Rolland, Justina
    Yong, Hui Yee
    Boon, Soo Heong
    PEERJ, 2024, 12