Scaling statistical multiple sequence alignment to large datasets

被引:0
|
作者
Michael Nute
Tandy Warnow
机构
[1] University of Illinois at Urbana-Champaign,Department of Statistics
[2] University of Illinois at Urbana-Champaign,Department of Computer Science
[3] University of Illinois at Urbana-Champaign,Department of Bioengineering
[4] University of Illinois at Urbana-Champaign,National Center for Supercomputing Applications
[5] University of Illinois at Urbana-Champaign,Carl R. Woese Institute for Genomic Biology
来源
BMC Genomics | / 17卷
关键词
Multiple sequence alignment; Boosting; MCMC;
D O I
暂无
中图分类号
学科分类号
摘要
引用
下载
收藏
相关论文
共 50 条
  • [21] Positional statistical significance in sequence alignment
    Yu, LH
    Smith, TF
    JOURNAL OF COMPUTATIONAL BIOLOGY, 1999, 6 (02) : 253 - 259
  • [22] Scaling associative classification for very large datasets
    Venturini L.
    Baralis E.
    Garza P.
    Venturini, Luca (luca.venturini@polito.it), 1600, SpringerOpen (04)
  • [23] Combining partial order alignment and progressive multiple sequence alignment increases alignment speed and scalability to very large alignment problems
    Grasso, C
    Lee, C
    BIOINFORMATICS, 2004, 20 (10) : 1546 - 1556
  • [24] Recursions for statistical multiple alignment
    Hein, J
    Jensen, JL
    Pedersen, CNS
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (25) : 14960 - 14965
  • [25] Multiple alignment by sequence annealing
    Schwartz, Ariel S.
    Pachter, Lior
    BIOINFORMATICS, 2007, 23 (02) : E24 - E29
  • [26] Overestimation for multiple sequence alignment
    Cazenave, Tristan
    2007 IEEE SYMPOSIUM ON COMPUTATIONAL INTELLIGENCE IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2007, : 159 - 164
  • [27] A TOOL FOR MULTIPLE SEQUENCE ALIGNMENT
    LIPMAN, DJ
    ALTSCHUL, SF
    KECECIOGLU, JD
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (12) : 4412 - 4415
  • [28] MULTIPLE SEQUENCE ALIGNMENT BY CONSENSUS
    WATERMAN, MS
    NUCLEIC ACIDS RESEARCH, 1986, 14 (22) : 9095 - 9102
  • [29] Multiple sequence alignment on an FPGA
    Oliver, T
    Schmidt, B
    Nathan, D
    Clemens, R
    Maskell, D
    11th International Conference on Parallel and Distributed Systems Workshops, Vol II, Proceedings,, 2005, : 326 - 330
  • [30] A MULTIPLE SEQUENCE ALIGNMENT PROGRAM
    SOBEL, E
    MARTINEZ, HM
    NUCLEIC ACIDS RESEARCH, 1986, 14 (01) : 363 - 374