Integrative genomic analysis by interoperation of bioinformatics tools in GenomeSpace

被引：0

作者：

Qu K. ^{[1
]}

Garamszegi S. ^{[2
]}

Wu F. ^{[2
]}

Thorvaldsdottir H. ^{[2
]}

Liefeld T. ^{[2
,3
]}

Ocana M. ^{[2
,3
]}

Borges-Rivera D. ^{[4
]}

Pochet N. ^{[2
,5
]}

Robinson J.T. ^{[2
,3
]}

Demchak B. ^{[3
]}

Hull T. ^{[3
]}

Ben-Artzi G. ^{[6
,7
]}

Blankenberg D. ^{[8
]}

Barber G.P. ^{[9
]}

Lee B.T. ^{[9
]}

Kuhn R.M. ^{[9
]}

Nekrutenko A. ^{[8
]}

Segal E. ^{[6
]}

Ideker T. ^{[3
]}

Reich M. ^{[2
,3
]}

Regev A. ^{[2
,4
,10
]}

Y Chang H. ^{[1
,11
]}

Mesirov J.P. ^{[2
,3
]}

机构：

[1] Program in Epithelial Biology, Stanford University, School of Medicine, Stanford, CA

[2] Broad Institute of MIT and Harvard, Cambridge, MA

[3] Department of Medicine, University of California, San Diego, San Diego, CA

[4] Department of Biology, Massachusetts Institute of Technology, Cambridge, MA

[5] Program in Translational NeuroPsychiatric Genomics, Brigham and Women's Hospital, Harvard Medical School, Boston, MA

[6] Department of Computer Science and Applied Mathematics, Weizmann Institute of Science, Rehovot

[7] Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot

[8] Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA

[9] UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA

[10] Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA

[11] Howard Hughes Medical Institute, Stanford University, Stanford, CA

来源：

Nature Methods | 2016年 / 13卷 / 3期

基金：

美国国家卫生研究院;

关键词：

D O I：

10.1038/nmeth.3732

中图分类号：

学科分类号：

摘要：

Complex biomedical analyses require the use of multiple software tools in concert and remain challenging for much of the biomedical research community. We introduce GenomeSpace (http://www.genomespace.org), a cloud-based, cooperative community resource that currently supports the streamlined interaction of 20 bioinformatics tools and data resources. To facilitate integrative analysis by non-programmers, it offers a growing set of 'recipes', short workflows to guide investigators through high-utility analysis tasks. © 2016 Nature America, Inc.

引用

页码：245 / 247

页数：2

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