Evaluation of cytochrome b mtDNA sequences in genetic diversity studies of Channa marulius (Channidae: Perciformes)

被引:0
|
作者
Maria Habib
W. S. Lakra
Vindhya Mohindra
Praveen Khare
A. S. Barman
Akanksha Singh
Kuldeep K. Lal
Peyush Punia
Asif A. Khan
机构
[1] National Bureau of Fish Genetic Resources,Department of Zoology, Faculty of Life Science
[2] Aligarh Muslim University,undefined
来源
Molecular Biology Reports | 2011年 / 38卷
关键词
Cytochrome b; mtDNA; Polymorphism; Genetic divergence;
D O I
暂无
中图分类号
学科分类号
摘要
Channa marulius (Hamilton, 1822) is a commercially important freshwater fish and a potential candidate species for aquaculture. The present study evaluated partial Cytochrome b gene sequence of mtDNA for determining the genetic variation in wild populations of C. marulius. Genomic DNA extracted from C. marulius samples (n = 23) belonging to 3 distant rivers; Mahanadi, Teesta and Yamuna was analyzed. Sequencing of 307 bp Cytochrome b mtDNA fragment revealed the presence of 5 haplotypes with haplotype diversity value of 0.763 and nucleotide diversity value of 0.0128. Single population specific haplotype was observed in Mahanadi and Yamuna samples and 3 haplotypes in Teesta samples. The analysis of data demonstrated the suitability of partial Cytochrome b sequence in determining the genetic diversity in C. marulius population.
引用
收藏
页码:841 / 846
页数:5
相关论文
共 50 条
  • [31] A mtDNA phylogeny of bustards (family Otididae) based on nucleotide sequences of the cytochrome b-gene
    Broders, O
    Osborne, T
    Wink, M
    JOURNAL FUR ORNITHOLOGIE, 2003, 144 (02): : 176 - 185
  • [32] Genetic diversity and population structure of Portunus sanguinolentus (Herbst, 1783) revealed by mtDNA COI sequences
    Ren, Guijing
    Ma, Hongyu
    Ma, Chunyan
    Wang, Wei
    Chen, Wei
    Ma, Lingbo
    MITOCHONDRIAL DNA PART A, 2017, 28 (4-5) : 740 - 746
  • [33] Genetic diversity of mtDNA D-loop sequences in four native Chinese chicken breeds
    Guo, H. W.
    Li, C.
    Wang, X. N.
    Li, Z. J.
    Sun, G. R.
    Li, G. X.
    Liu, X. J.
    Kang, X. T.
    Han, R. L.
    BRITISH POULTRY SCIENCE, 2017, 58 (05) : 490 - 497
  • [34] Genetic Diversity and Phylogenetic Evolution of Tibetan Sheep Based on mtDNA D-Loop Sequences
    Liu, Jianbin
    Ding, Xuezhi
    Zeng, Yufeng
    Yue, Yaojing
    Guo, Xian
    Guo, Tingting
    Chu, Min
    Wang, Fan
    Han, Jilong
    Feng, Ruilin
    Sun, Xiaoping
    Niu, Chune
    Yang, Bohui
    Guo, Jian
    Yuan, Chao
    PLOS ONE, 2016, 11 (07):
  • [35] Genetic diversity of cytochrome b in Iberian ibex from Andalusia
    Marquez, Francisco J.
    Granados, Jose E.
    Caruz, Antonio
    Soriguer, Ramon C.
    Fandos, Paulino
    Cano-Manuel, Francisco J.
    Perez, Jesus M.
    MAMMALIAN BIOLOGY, 2020, 100 (06) : 675 - 684
  • [36] Genetic diversity of mitochondrial cytochrome b gene in swamp buffalo
    Sun, T.
    Wang, S.
    Hanif, Q.
    Chen, N.
    Chen, H.
    Lei, C.
    ANIMAL GENETICS, 2020, 51 (06) : 977 - 981
  • [37] Genetic diversity of cytochrome b in Iberian ibex from Andalusia
    Francisco J. Márquez
    José E. Granados
    Antonio Caruz
    Ramón C. Soriguer
    Paulino Fandos
    Francisco J. Cano-Manuel
    Jesús M. Pérez
    Mammalian Biology, 2020, 100 : 675 - 684
  • [38] Gene flow patterns of the euphausiid, Meganyctiphanes norvegica, in the NW Atlantic based on mtDNA sequences for cytochrome b and cytochrome oxidase I
    Bucklin, A
    Smolenack, SB
    Bentley, AM
    Wiebe, PH
    JOURNAL OF PLANKTON RESEARCH, 1997, 19 (11) : 1763 - 1781
  • [39] THE GENETIC DIVERSITY OF KEJOBONG GOAT BASED ON CYTOCHROME B GENE
    Jiyanto
    Sutopo
    Kurnianto, E.
    JOURNAL OF THE INDONESIAN TROPICAL ANIMAL AGRICULTURE, 2014, 39 (02) : 75 - 82
  • [40] Genetic diversity and population demography of the endemic species Acrossocheilus Iongipinnis (Teleostei, Cyprinidae) based on mtDNA COI and cyt b Egene sequences
    Zheng, Lan-Ping
    Yang, Jun-Xing
    MITOCHONDRIAL DNA PART A, 2018, 29 (03) : 403 - 408