Computational framework decomposes and annotates single-cell and spatial omics

被引:0
|
作者
机构
来源
Nature Biotechnology | 2023年 / 41卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
We developed TACCO, a versatile and efficient computational annotation framework, leveraging growing single-cell and spatial omics data to identify cell types and states, decipher molecular and cellular tissue structure, and resolve differentiation trajectories.
引用
收藏
页码:1396 / 1397
页数:1
相关论文
共 50 条
  • [31] Cell population-based framework of genetic epidemiology in the single-cell omics era
    Okada, Daigo
    Zheng, Cheng
    Cheng, Jian Hao
    Yamada, Ryo
    BIOESSAYS, 2022, 44 (01)
  • [32] TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics
    Mages, Simon
    Moriel, Noa
    Avraham-Davidi, Inbal
    Murray, Evan
    Watter, Jan
    Chen, Fei
    Rozenblatt-Rosen, Orit
    Klughammer, Johanna
    Regev, Aviv
    Nitzan, Mor
    NATURE BIOTECHNOLOGY, 2023, 41 (10) : 1465 - +
  • [33] TACCO unifies annotation transfer and decomposition of cell identities for single-cell and spatial omics
    Simon Mages
    Noa Moriel
    Inbal Avraham-Davidi
    Evan Murray
    Jan Watter
    Fei Chen
    Orit Rozenblatt-Rosen
    Johanna Klughammer
    Aviv Regev
    Mor Nitzan
    Nature Biotechnology, 2023, 41 : 1465 - 1473
  • [34] Defining Cell Identity with Single-Cell Omics
    Mincarelli, Laura
    Lister, Ashleigh
    Lipscombe, James
    Macaulay, Iain C.
    PROTEOMICS, 2018, 18 (18)
  • [35] Single-Cell (Multi)omics Technologies
    Chappell, Lia
    Russell, Andrew J. C.
    Voet, Thierry
    ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 19, 2018, 19 : 15 - 41
  • [36] Single-cell technologies in environmental omics
    Kodzius, Rimantas
    Gojobori, Takashi
    GENE, 2016, 576 (02) : 701 - 707
  • [37] Microfluidic Single-Cell Omics Analysis
    Xu, Xing
    Wang, Junxia
    Wu, Lingling
    Guo, Jingjing
    Song, Yanling
    Tian, Tian
    Wang, Wei
    Zhu, Zhi
    Yang, Chaoyong
    SMALL, 2020, 16 (09)
  • [38] Integration of Computational Analysis and Spatial Transcriptomics in Single-cell Studies
    Wang, Ran
    Peng, Guangdun
    Tam, Patrick P. L.
    Jing, Naihe
    GENOMICS PROTEOMICS & BIOINFORMATICS, 2023, 21 (01) : 13 - 23
  • [39] Single-cell and spatial-omics in delineating immune-related diseases
    Wen, Shaodi
    Mo, Steven
    Zhou, Jin
    Lv, Yufeng
    Khazaie, Khashayarsha
    Yu, Guangchuang
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2024, 12
  • [40] Decoding maize meristems maintenance and differentiation: integrating single-cell and spatial omics
    Li, Bin
    Liu, Wenhao
    Xu, Jie
    Huang, Xuxu
    Yang, Long
    Xu, Fang
    JOURNAL OF GENETICS AND GENOMICS, 2025, 52 (03) : 319 - 333