Statistical Approach for Improving Genomic Prediction Accuracy through Efficient Diagnostic Measure of Influential Observation

被引:0
|
作者
Neeraj Budhlakoti
Anil Rai
D. C. Mishra
机构
[1] Centre for Agricultural Bioinformatics,
[2] ICAR-Indian Agricultural Statistics Research Institute,undefined
来源
Scientific Reports | / 10卷
关键词
D O I
暂无
中图分类号
学科分类号
摘要
It is expected the predictive performance of genomic prediction methods may be adversely affected in the presence of outliers. In agriculture science an outlier may arise due to wrong data imputation, outlying response, and in a series of trials over the time or location. Although several statistical procedures are already there in literature for identification of outlier but identification of true outlier is still a challenge especially in case of high dimensional genomic data. Here we have proposed an efficient approach for detecting outlier in high dimensional genomic data, our approach is p-value based combination methods to produce single p-value for detecting the outliers. Robustness of our approach has been tested using simulated data through the evaluation measures like precision, recall etc. It has been observed that significant improvement in the performance of genomic prediction has been obtained by detecting the outliers and handling them accordingly through our proposed approach using real data.
引用
收藏
相关论文
共 50 条
  • [41] Improving genomic prediction accuracy for meat tenderness in Nellore cattle using artificial neural networks
    Brito Lopes, Fernando
    Magnabosco, Claudio U.
    Passafaro, Tiago L.
    Brunes, Ludmilla C.
    Costa, Marcos F. O.
    Eifert, Eduardo C.
    Narciso, Marcelo G.
    Rosa, Guilherme J. M.
    Lobo, Raysildo B.
    Baldi, Fernando
    JOURNAL OF ANIMAL BREEDING AND GENETICS, 2020, 137 (05) : 438 - 448
  • [42] KAML: improving genomic prediction accuracy of complex traits using machine learning determined parameters
    Lilin Yin
    Haohao Zhang
    Xiang Zhou
    Xiaohui Yuan
    Shuhong Zhao
    Xinyun Li
    Xiaolei Liu
    Genome Biology, 21
  • [43] Improving the accuracy of genomic prediction in Chinese Holstein cattle by using one-step blending
    Xiujin Li
    Sheng Wang
    Ju Huang
    Leyi Li
    Qin Zhang
    Xiangdong Ding
    Genetics Selection Evolution, 46
  • [44] Improving Dynamic Prediction Accuracy Through Multi-level Phase Analysis
    Fang, Zhenman
    Li, Jiaxin
    Zhang, Weihua
    Li, Yi
    Chen, Haibo
    Zang, Binyu
    ACM SIGPLAN NOTICES, 2012, 47 (05) : 89 - 97
  • [45] Improving prediction accuracy of soil water storage through reducing sampling frequency
    Li, Xuezhang
    Shao, Ming'an
    Xu, Xianli
    Wang, Kelin
    EUROPEAN JOURNAL OF AGRONOMY, 2022, 136
  • [46] Improving prediction accuracy in agricultural markets through the CIMA-AttGRU model
    Jiang, Yankun
    Liu, Jinhui
    Li, Xiaotuan
    PLOS ONE, 2024, 19 (12):
  • [47] Enhancing Genomic Prediction Accuracy of Reproduction Traits in Rongchang Pigs Through Machine Learning
    Wang, Junge
    Chai, Jie
    Chen, Li
    Zhang, Tinghuan
    Long, Xi
    Diao, Shuqi
    Chen, Dong
    Guo, Zongyi
    Tang, Guoqing
    Wu, Pingxian
    ANIMALS, 2025, 15 (04):
  • [48] An efficient approach for improving the predictive accuracy of multi-criteria recommender system
    Anwar K.
    Zafar A.
    Iqbal A.
    International Journal of Information Technology, 2024, 16 (2) : 809 - 816
  • [49] Improving the Accuracy of Prediction Applications by Efficient Tuning of Gradient Descent Using Genetic Algorithms
    Duran-Dominguez, Arturo
    Gomez-Pulido, Juan A.
    Rodriguez-Lozano, David
    HYBRID ARTIFICIAL INTELLIGENT SYSTEMS (HAIS 2018), 2018, 10870 : 210 - 221
  • [50] A network fault diagnostic approach based on a statistical traffic normality prediction algorithm
    Jiang, J
    Papavassiliou, S
    GLOBECOM'03: IEEE GLOBAL TELECOMMUNICATIONS CONFERENCE, VOLS 1-7, 2003, : 2918 - 2922