Comparison of codon usage measures and their applicability in prediction of microbial gene expressivity

被引:0
|
作者
Fran Supek
Kristian Vlahoviček
机构
[1] Zagreb University,Department of Molecular Biology, Division of Biology, Faculty of Science
[2] International Centre for Genetic Engineering and Biotechnology,Protein Structure and Bioinformatics
来源
BMC Bioinformatics | / 6卷
关键词
Codon; Codon Usage; Gene Length; Nucleotide Composition; Synonymous Codon;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [31] Codon usage by chloroplast gene is bias in Hemiptelea davidii
    Huabo Liu
    Yizeng Lu
    Baoliang Lan
    Jichen Xu
    Journal of Genetics, 2020, 99
  • [32] Evolutionary Patterns of Codon Usage in the Chloroplast Gene rbcL
    Dennis P. Wall
    Joshua T. Herbeck
    Journal of Molecular Evolution, 2003, 56 : 673 - 688
  • [33] Strong associations between gene function and codon usage
    Fuglsang, A
    APMIS, 2003, 111 (09) : 843 - 847
  • [34] Codon usage bias in the N gene of rabies virus
    He, Wanting
    Zhang, Hongyu
    Zhang, Yuchen
    Wang, Ruyi
    Lu, Sijia
    Ji, Yanjie
    Liu, Chang
    Yuan, Pengkun
    Su, Shuo
    INFECTION GENETICS AND EVOLUTION, 2017, 54 : 458 - 465
  • [35] Improving TCR gene transfer by optimal codon usage
    不详
    IMMUNOBIOLOGY, 2004, 209 (4-6) : 365 - 366
  • [36] Optimizing the codon usage of synthetic gene with QPSO algorithm
    Cai, Yujie
    Sun, Jun
    Wang, Jie
    Ding, Yanrui
    Tian, Na
    Liao, Xiangru
    Xu, Wenbo
    JOURNAL OF THEORETICAL BIOLOGY, 2008, 254 (01) : 123 - 127
  • [37] Nucleotide composition and codon usage bias of SRY gene
    Choudhury, M. N.
    Uddin, A.
    Chakraborty, S.
    ANDROLOGIA, 2018, 50 (01)
  • [38] Comparison of codon usage in mycobacteriophages with and without tRNAs in their genomes
    Gill, Ethan S.
    Rinehart, Claire A.
    BMC BIOINFORMATICS, 2013, 14
  • [39] Comparison of codon usage in mycobacteriophages with and without tRNAs in their genomes
    Ethan S Gill
    Claire A Rinehart
    BMC Bioinformatics, 14
  • [40] Environmental shaping of codon usage and functional adaptation across microbial communities
    Roller, Masa
    Lucic, Vedran
    Nagy, Istvan
    Perica, Tina
    Vlahovicek, Kristian
    NUCLEIC ACIDS RESEARCH, 2013, 41 (19) : 8842 - 8852