Small-scale mutations are infrequent as mechanisms of resistance in post-PARP inhibitor tumour samples in high grade serous ovarian cancer

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作者
Nikki L. Burdett
Madelynne O. Willis
Ahwan Pandey
Sian Fereday
Anna DeFazio
David D. L. Bowtell
Elizabeth L. Christie
机构
[1] Peter MacCallum Cancer Centre,Sir Peter MacCallum Department of Oncology
[2] The University of Melbourne,Centre for Cancer Research
[3] Box Hill Hospital,The Daffodil Centre
[4] The Westmead Institute for Medical Research,Department of Gynaecological Oncology
[5] The University of Sydney,Department of Pathology
[6] a joint venture with Cancer Council NSW,Sir Peter MacCallum Department of Oncology
[7] Westmead Hospital,Department of Biochemistry and Molecular Biology
[8] QIMR Berghofer Medical Research Institute,Ovarian Cancer Action Research Centre, Department of Surgery and Cancer
[9] University of Melbourne,Melbourne School of Population and Global Health
[10] The University of Melbourne,Western Australian Research Tissue Network (WARTN)
[11] The University of Melbourne,Women and Infant’s Research Foundation
[12] Imperial College London,Bankstown Cancer Centre
[13] The University of Sydney,Prince of Wales Clinical School
[14] The University of Melbourne,Department of Pathology, Westmead Clinical School
[15] John Hunter Hospital,Faculty of Medicine
[16] Royal Hospital for Women,undefined
[17] Royal North Shore Hospital,undefined
[18] Royal Prince Alfred Hospital,undefined
[19] Royal Adelaide Hospital,undefined
[20] North Terrace,undefined
[21] Royal Hobart Hospital,undefined
[22] Monash Medical Centre,undefined
[23] St John of God Pathology,undefined
[24] King Edward Memorial Hospital,undefined
[25] St John of God Hospital,undefined
[26] Canberra Hospital,undefined
[27] Australian Capitol Territory,undefined
[28] Bankstown Hospital,undefined
[29] Northern Haematology & Oncology Group,undefined
[30] Integrated Cancer Centre,undefined
[31] Illawarra Shoalhaven Local Health District,undefined
[32] Wollongong Hospital,undefined
[33] Nepean Hospital,undefined
[34] Newcastle Mater Misericordiae Hospital,undefined
[35] Port Macquarie Base Hospital,undefined
[36] University of New South Wales,undefined
[37] St George Hospital,undefined
[38] St Vincent’s Hospital,undefined
[39] Wagga Wagga Base Hospital,undefined
[40] Crown Princess Mary Cancer Centre,undefined
[41] Westmead Hospital,undefined
[42] Westmead Hospital,undefined
[43] The University of Sydney,undefined
[44] Mater Misericordiae Hospital,undefined
[45] Raymond Terrace,undefined
[46] The Royal Brisbane and Women’s Hospital,undefined
[47] Wesley Hospital,undefined
[48] Burnside Hospital,undefined
[49] Queen Elizabeth Hospital,undefined
[50] Freemasons Hospital,undefined
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摘要
While the introduction of poly-(ADP)-ribose polymerase (PARP) inhibitors in homologous recombination DNA repair (HR) deficient high grade serous ovarian, fallopian tube and primary peritoneal cancers (HGSC) has improved patient survival, resistance to PARP inhibitors frequently occurs. Preclinical and translational studies have identified multiple mechanisms of resistance; here we examined tumour samples collected from 26 women following treatment with PARP inhibitors as part of standard of care or their enrolment in clinical trials. Twenty-one had a germline or somatic BRCA1/2 mutation. We performed targeted sequencing of 63 genes involved in DNA repair processes or implicated in ovarian cancer resistance. We found that just three individuals had a small-scale mutation as a definitive resistance mechanism detected, having reversion mutations, while six had potential mechanisms of resistance detected, with alterations related to BRCA1 function and mutations in SHLD2. This study indicates that mutations in genes related to DNA repair are detected in a minority of HGSC patients as genetic mechanisms of resistance. Future research into resistance in HGSC should focus on copy number, transcriptional and epigenetic aberrations, and the contribution of the tumour microenvironment.
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