A standardized nomenclature for mammalian histone genes

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作者
Ruth L. Seal
Paul Denny
Elspeth A. Bruford
Anna K. Gribkova
David Landsman
William F. Marzluff
Monica McAndrews
Anna R. Panchenko
Alexey K. Shaytan
Paul B. Talbert
机构
[1] European Bioinformatics Institute,European Molecular Biology Laboratory
[2] Wellcome Genome Campus,Department of Haematology, School of Clinical Medicine
[3] University of Cambridge,Department of Biology
[4] Lomonosov Moscow State University,Intramural Research Program
[5] National Library of Medicine,Integrated Program for Biological and Genome Sciences
[6] National Institutes of Health,Department of Pathology and Molecular Medicine, School of Medicine
[7] University of North Carolina,undefined
[8] Mouse Genome Informatics,undefined
[9] The Jackson Laboratory,undefined
[10] Queen’s University,undefined
[11] Howard Hughes Medical Institute,undefined
[12] Fred Hutchinson Cancer Research Center,undefined
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摘要
Histones have a long history of research in a wide range of species, leaving a legacy of complex nomenclature in the literature. Community-led discussions at the EMBO Workshop on Histone Variants in 2011 resulted in agreement amongst experts on a revised systematic protein nomenclature for histones, which is based on a combination of phylogenetic classification and historical symbol usage. Human and mouse histone gene symbols previously followed a genome-centric system that was not applicable across all vertebrate species and did not reflect the systematic histone protein nomenclature. This prompted a collaboration between histone experts, the Human Genome Organization (HUGO) Gene Nomenclature Committee (HGNC) and Mouse Genomic Nomenclature Committee (MGNC) to revise human and mouse histone gene nomenclature aiming, where possible, to follow the new protein nomenclature whilst conforming to the guidelines for vertebrate gene naming. The updated nomenclature has also been applied to orthologous histone genes in chimpanzee, rhesus macaque, dog, cat, pig, horse and cattle, and can serve as a framework for naming other vertebrate histone genes in the future.
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