Methods used in the spatial analysis of tuberculosis epidemiology: a systematic review

被引:75
|
作者
Shaweno, Debebe [1 ,2 ]
Karmakar, Malancha [2 ,3 ]
Alene, Kefyalew Addis [4 ,5 ]
Ragonnet, Romain [1 ,6 ]
Clements, Archie C. A. [7 ]
Trauer, James M. [2 ,8 ]
Denholm, Justin T. [2 ,3 ]
McBryde, Emma S. [1 ,9 ]
机构
[1] Univ Melbourne, Dept Med, Melbourne, Vic, Australia
[2] Peter Doherty Inst Infect & Immun, Victorian TB Program, Melbourne, Vic, Australia
[3] Univ Melbourne, Dept Microbiol & Immunol, Melbourne, Vic, Australia
[4] Australian Natl Univ, Res Sch Populat Hlth, Coll Hlth & Med, Canberra, ACT, Australia
[5] Univ Gondar, Inst Publ Hlth, Coll Med & Hlth Sci, Gondar, Ethiopia
[6] Burnet Inst, Melbourne, Vic, Australia
[7] Curtin Univ, Bentley, WA, Australia
[8] Monash Univ, Sch Publ Hlth & Prevent Med, Melbourne, Vic, Australia
[9] James Cook Univ, Australian Inst Trop Hlth & Med, Townsville, Qld, Australia
来源
BMC MEDICINE | 2018年 / 16卷
基金
澳大利亚国家健康与医学研究理事会;
关键词
Spatial analysis; Tuberculosis; Genotypic cluster; MULTIDRUG-RESISTANT TUBERCULOSIS; GEOGRAPHICAL INFORMATION-SYSTEM; NEW-YORK-CITY; MYCOBACTERIUM-TUBERCULOSIS; PULMONARY TUBERCULOSIS; RISK-FACTORS; SPATIOTEMPORAL ANALYSIS; SAO-PAULO; HOT-SPOTS; TRANSMISSION;
D O I
10.1186/s12916-018-1178-4
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
BackgroundTuberculosis (TB) transmission often occurs within a household or community, leading to heterogeneous spatial patterns. However, apparent spatial clustering of TB could reflect ongoing transmission or co-location of risk factors and can vary considerably depending on the type of data available, the analysis methods employed and the dynamics of the underlying population. Thus, we aimed to review methodological approaches used in the spatial analysis of TB burden.MethodsWe conducted a systematic literature search of spatial studies of TB published in English using Medline, Embase, PsycInfo, Scopus and Web of Science databases with no date restriction from inception to 15 February 2017.The protocol for this systematic review was prospectively registered with PROSPERO (CRD42016036655).ResultsWe identified 168 eligible studies with spatial methods used to describe the spatial distribution (n=154), spatial clusters (n=73), predictors of spatial patterns (n=64), the role of congregate settings (n=3) and the household (n=2) on TB transmission. Molecular techniques combined with geospatial methods were used by 25 studies to compare the role of transmission to reactivation as a driver of TB spatial distribution, finding that geospatial hotspots are not necessarily areas of recent transmission. Almost all studies used notification data for spatial analysis (161 of 168), although none accounted for undetected cases. The most common data visualisation technique was notification rate mapping, and the use of smoothing techniques was uncommon. Spatial clusters were identified using a range of methods, with the most commonly employed being Kulldorff's spatial scan statistic followed by local Moran's I and Getis and Ord's local Gi(d) tests. In the 11 papers that compared two such methods using a single dataset, the clustering patterns identified were often inconsistent. Classical regression models that did not account for spatial dependence were commonly used to predict spatial TB risk. In all included studies, TB showed a heterogeneous spatial pattern at each geographic resolution level examined.ConclusionsA range of spatial analysis methodologies has been employed in divergent contexts, with all studies demonstrating significant heterogeneity in spatial TB distribution. Future studies are needed to define the optimal method for each context and should account for unreported cases when using notification data where possible. Future studies combining genotypic and geospatial techniques with epidemiologically linked cases have the potential to provide further insights and improve TB control.
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页数:18
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