Template-directed ligation on repetitive DNA sequences: a chemical method to probe the length of Huntington DNA

被引:18
|
作者
Kern, Anika [1 ]
Seitz, Oliver [1 ]
机构
[1] Humboldt Univ, Inst Chem, D-12489 Berlin, Germany
关键词
NUCLEIC-ACIDS; MYOTONIC-DYSTROPHY; PNA-LIGATION; CTG REPEAT; RNA; RECOGNITION; REACTIVITY; EXPANSION; CELLS;
D O I
10.1039/c4sc01974a
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Several genomic disorders are caused by an excessive number of DNA triplet repeats. We developed a DNA-templated reaction in which product formation occurs only when the number of repeats exceeds a threshold indicative for the outbreak of Chorea Huntington. The combined use of native chemical PNA ligation and auxiliary DNA probes enabled reactions on templates obtained from human genomic DNA.
引用
收藏
页码:724 / 728
页数:5
相关论文
共 50 条
  • [1] Template-directed Chemical Ligation to Obtain 3′-3′ and 5′-5′ Phosphodiester DNA Linkages
    Chen, Haodong
    Du, Feng
    Chen, Gangyi
    Streckenbach, Frank
    Yasmeen, Afshan
    Zhao, Yun
    Tang, Zhuo
    SCIENTIFIC REPORTS, 2014, 4
  • [2] OLIGONUCLEOTIDE CIRCULARIZATION BY TEMPLATE-DIRECTED CHEMICAL LIGATION
    DOLINNAYA, NG
    BLUMENFELD, M
    MERENKOVA, IN
    ORETSKAYA, TS
    KRYNETSKAYA, NF
    IVANOVSKAYA, MG
    VASSEUR, M
    SHABAROVA, ZA
    NUCLEIC ACIDS RESEARCH, 1993, 21 (23) : 5403 - 5407
  • [3] The fidelity of template-directed oligonucleotide ligation and its relevance to DNA computation
    James, KD
    Boles, AR
    Henckel, D
    Ellington, AD
    NUCLEIC ACIDS RESEARCH, 1998, 26 (22) : 5203 - 5211
  • [4] Template-directed Chemical Ligation to Obtain 3′-3′ and 5′-5′ Phosphodiester DNA Linkages
    Haodong Chen
    Feng Du
    Gangyi Chen
    Frank Streckenbach
    Afshan Yasmeen
    Yun Zhao
    Zhuo Tang
    Scientific Reports, 4
  • [5] Template-directed ligation: From DNA towards different versatile templates
    Leitzel, JC
    Lynn, DG
    CHEMICAL RECORD, 2001, 1 (01): : 53 - 62
  • [6] Surprising fidelity of template-directed chemical ligation of oligonucleotides
    James, KD
    Ellington, AD
    CHEMISTRY & BIOLOGY, 1997, 4 (08): : 595 - 605
  • [7] Template directed chemical ligation and oligomerization of DNA on modified DNA templates.
    Turnbull, KD
    Selvasekaran, J
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1999, 217 : U119 - U119
  • [8] Viscoelastic modeling of template-directed DNA synthesis
    Stengel, G
    Höök, F
    Knoll, W
    ANALYTICAL CHEMISTRY, 2005, 77 (11) : 3709 - 3714
  • [9] A comparison of RNA with DNA in template-directed synthesis
    Zielinski, M
    Kozlov, IA
    Orgel, LE
    HELVETICA CHIMICA ACTA, 2000, 83 (08) : 1678 - 1684
  • [10] Template-Directed Incorporation of Functional Molecules into DNA
    Kanlidere, Zeynep
    CHEMBIOCHEM, 2023, 24 (04)