Improving scalability in systems neuroscience

被引:15
|
作者
Chen, Zhe Sage [1 ,2 ]
Pesaran, Bijan [2 ,3 ,4 ]
机构
[1] NYU, Sch Med, Dept Psychiat, Dept Neurosci & Physiol, 550 1St Ave, New York, NY 10016 USA
[2] NYU, Sch Med, Neurosci Inst, 550 1St Ave, New York, NY 10016 USA
[3] NYU, Ctr Neural Sci, 550 1St Ave, New York, NY 10003 USA
[4] NYU, Sch Med, Dept Neurol, 550 1St Ave, New York, NY 10016 USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
BRAIN-MACHINE INTERFACES; DEEP NEURAL-NETWORKS; FIELD-OF-VIEW; LARGE-SCALE; CLOSED-LOOP; HIGH-DENSITY; DESIGN; NEURONS; REPRESENTATIONS; NEUROMODULATION;
D O I
10.1016/j.neuron.2021.03.025
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Emerging technologies to acquire data at increasingly greater scales promise to transform discovery in systems neuroscience. However, current exponential growth in the scale of data acquisition is a double-edged sword. Scaling up data acquisition can speed up the cycle of discovery but can also misinterpret the results or possibly slow down the cycle because of challenges presented by the curse of high-dimensional data. Active, adaptive, closed-loop experimental paradigms use hardware and algorithms optimized to enable time-critical computation to provide feedback that interprets the observations and tests hypotheses to actively update the stimulus or stimulation parameters. In this perspective, we review important concepts of active and adaptive experiments and discuss how selectively constraining the dimensionality and optimizing strategies at different stages of discovery loop can help mitigate the curse of high-dimensional data. Active and adaptive closed-loop experimental paradigms can speed up discovery despite an exponentially increasing data scale, offering a road map to timely and iterative hypothesis revision and discovery in an era of exponential growth in neuroscience.
引用
收藏
页码:1776 / 1790
页数:15
相关论文
共 50 条
  • [41] Designed Features for Improving Openness, Scalability and Programmability in the Fog Computing-Based IoT Systems
    Tran Q.M.
    Nguyen P.H.
    Tsuchiya T.
    Toulouse M.
    SN Computer Science, 2020, 1 (4)
  • [42] Improving Scalability of Generic Online Calibration for Real-Time Dynamic Traffic Assignment Systems
    Prakash, A. Arun
    Seshadri, Ravi
    Antoniou, Constantinos
    Pereira, Francisco C.
    Ben-Akiva, Moshe
    TRANSPORTATION RESEARCH RECORD, 2018, 2672 (48) : 79 - 92
  • [43] Improving the Scalability of SimGrid Using Dynamic Routing
    De Munck, Silas
    Vanmechelen, Kurt
    Broeckhove, Jan
    COMPUTATIONAL SCIENCE - ICCS 2009, PART I, 2009, 5544 : 406 - 415
  • [44] Improving Scalability of CMPs with Dense ACCs Coverage
    Teimouri, Nasibeh
    Tabkhi, Hamed
    Schirner, Gunar
    PROCEEDINGS OF THE 2016 DESIGN, AUTOMATION & TEST IN EUROPE CONFERENCE & EXHIBITION (DATE), 2016, : 1610 - 1615
  • [45] GNN Transformation Framework for Improving Efficiency and Scalability
    Maekawa, Seiji
    Sasaki, Yuya
    Fletcher, George
    Onizuka, Makoto
    MACHINE LEARNING AND KNOWLEDGE DISCOVERY IN DATABASES, ECML PKDD 2022, PT II, 2023, 13714 : 360 - 376
  • [46] Improving the Scalability of Web Applications with Runtime Transformations
    Robles Luna, Esteban
    Matias Rivero, Jose
    Urbieta, Matias
    Cabot, Jordi
    WEB ENGINEERING, ICWE 2014, 2014, 8541 : 430 - 439
  • [47] Improving the Scalability of Automatic Linearizability Checking in SPIN
    Doolan, Patrick
    Smith, Graeme
    Zhang, Chenyi
    Krishnan, Padmanabhan
    FORMAL METHODS AND SOFTWARE ENGINEERING, ICFEM 2017, 2017, 10610 : 105 - 121
  • [48] Improving the Scalability of Web Applications with Runtime Transformations
    Luna, Esteban Robles
    Rivero, José Matías
    Urbieta, Matias
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2014, 8541 : 430 - 439
  • [49] Improving the scalability of web applications with runtime transformations
    Luna, Esteban Robles
    Rivero, José Matías
    Urbieta, Matias
    Cabot, Jordi
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 2014, 8541 : 430 - 439
  • [50] Improving the performance scalability of the community atmosphere model
    Mirin, Arthur A.
    Worley, Patrick H.
    INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS, 2012, 26 (01): : 17 - 30