Velocity Response Curves Support the Role of Continuous Entrainment in Circadian Clocks

被引:21
|
作者
Taylor, Stephanie R. [2 ]
Webb, Alexis B. [3 ]
Smith, Katherine S. [2 ]
Petzold, Linda R. [4 ]
Doyle, Francis J., III [1 ]
机构
[1] Univ Calif Santa Barbara, Dept Chem Engn, Santa Barbara, CA 93106 USA
[2] Colby Coll, Dept Comp Sci, Waterville, ME 04901 USA
[3] Washington Univ, Dept Biol, St Louis, MO 63130 USA
[4] Univ Calif Santa Barbara, Dept Comp Sci, Santa Barbara, CA 93106 USA
关键词
phase response curves; mathematical modeling; circadian clock; photoperiodism; entrainment; velocity response curves; FUNCTIONAL-ANALYSIS; NOCTURNAL RODENTS; LIGHT; PHASE; PACEMAKERS; MODEL; REDUCTION; RHYTHMS;
D O I
10.1177/0748730409360949
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Circadian clocks drive endogenous oscillations in organisms across the tree of life. The Earth's daily light/dark cycle entrains these clocks to the environment. Two major theories of light entrainment have been presented in the literature. The discrete theory emphasizes the instantaneous phase-shifting behavior of short pulses of light, and the continuous theory emphasizes changes to the period of oscillations in constant-light conditions. Historically, the primary tool for predicting and understanding discrete entrainment has been the PRC, which measures discrete adjustments to the clock's phase. The authors present a unified theory, which relies on a velocity response curve (VRC), similar in shape to a PRC, but that describes continuous adjustments to the clock's speed. The VRC explains data from both discrete and continuous light experiments and is therefore an invaluable tool to understand entrainment. The authors relate VRC features to specific entrainment behaviors, such as seasonal adjustments to the phase of entrainment. Furthermore, they estimate a VRC from PRC data and successfully reproduce additional PRC data. Finally, they entrain a VRC-based model to natural light/dark cycles, demonstrating the unified theory's ability to predict clock behavior in the face of a fluctuating signal. The results indicate that a VRC-based model not only provides a comprehensive understanding of entrainment but also has excellent predictive capabilities.
引用
收藏
页码:138 / 149
页数:12
相关论文
共 50 条
  • [11] Robust Entrainment of Circadian Oscillators Requires Specific Phase Response Curves
    Pfeuty, Benjamin
    Thommen, Quentin
    Lefranc, Marc
    BIOPHYSICAL JOURNAL, 2011, 100 (11) : 2557 - 2565
  • [12] Broken circadian clocks: a clock gene mutation and entrainment by feeding
    Stephan, FK
    AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY, 2003, 285 (01) : R32 - R33
  • [14] Circadian Clocks in the Cnidaria: Environmental Entrainment, Molecular Regulation, and Organismal Outputs
    Reitzel, Adam M.
    Tarrant, Ann M.
    Levy, Oren
    INTEGRATIVE AND COMPARATIVE BIOLOGY, 2013, 53 (01) : 118 - 130
  • [15] Circadian Clocks and Energy Metabolism, Response
    Boerger, Rolf
    DEUTSCHE MEDIZINISCHE WOCHENSCHRIFT, 2014, 139 (24) : 1320 - 1320
  • [16] Circadian clocks and their role in lactation competence
    Casey, T. M.
    Plaut, K.
    Boerman, J.
    DOMESTIC ANIMAL ENDOCRINOLOGY, 2022, 78
  • [17] Network switches and their role in circadian clocks
    del Olmo, Marta
    Legewie, Stefan
    Brunner, Michael
    Hoefer, Thomas
    Kramer, Achim
    Bluethgen, Nils
    Herzel, Hanspeter
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2024, 300 (05)
  • [18] The role of Clock in the plasticity of circadian entrainment
    Udo, R
    Hamada, T
    Horikawa, K
    Iwahana, E
    Miyakawa, K
    Otsuka, K
    Shibata, S
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2004, 318 (04) : 893 - 898
  • [19] Independent peripheral clocks and direct light entrainment within the zebrafish circadian system
    Cermakian, N
    Whitmore, D
    Foulkes, NS
    Sassone-Corsi, P
    JOURNAL OF MOLECULAR MEDICINE-JMM, 2000, 78 (07): : B46 - B46
  • [20] Toward Personalizing Exercise to Support Circadian Entrainment of Glycemia in Type 2 Diabetes Response
    Teo, Shaun Y. M.
    Kanaley, Jill A.
    Guelfi, Kym J.
    Fairchild, Timothy J.
    MEDICINE AND SCIENCE IN SPORTS AND EXERCISE, 2020, 52 (05): : 1236 - 1236