Accurate charge density of trialanine: a comparison of the multipole formalism and the maximum entropy method (MEM)

被引:31
|
作者
Hofmann, Andreas [1 ]
Netzel, Jeanette [1 ]
van Smaalen, Sander [1 ]
机构
[1] Univ Bayreuth, Crystallog Lab, D-95440 Bayreuth, Germany
关键词
D O I
10.1107/S0108768106052153
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
An accurate charge density study of trialanine is presented with the maximum entropy method (MEM), on the basis of the same reflection data as was used for a multipole refinement [Rodel et al. (2006). Org. Biomol. Chem. 4, 475-481]. With the MEM, the optimum fit to the data is found to correspond to a final value of chi(2) which is less than its statistical expectation value N-Ref, where N-Ref is the number of reflections. A refinement strategy is presented that determines the optimal goal for chi(2). It is shown that the MEM and the multipole method are on a par with regard to the reproduction of atomic charges and volumes, general topological features and trends in the charge density in the bond critical points (BCPs). Regarding the values of the charge densities in the BCPs, agreement between quantum chemical calculations, the multipole method and MEM is good, but not perfect. In the case of the Laplacians, the coincidence is not as good and especially the Laplacians of the C-O bonds differ strongly. One of the reasons for the observed differences in the topological parameters in the BCPs is the fact that MEM densities still include the effects of thermal motion, whereas multipole densities are free from the effects of thermal motion. Hydrogen bonds are more convincingly reproduced by the MEM than by multipole models.
引用
收藏
页码:285 / 295
页数:11
相关论文
共 50 条
  • [31] Studies of the pressure dependence of the charge density distribution in cerium phosphide by the maximum-entropy method
    Ishimatsu, N
    Ohishi, Y
    Takata, M
    Nishibori, E
    Sakata, M
    Hayashi, J
    Shirotani, I
    Shimomura, O
    JOURNAL OF PHYSICS-CONDENSED MATTER, 2002, 14 (44) : 11143 - 11146
  • [32] Charge-density analysis of hydrogen-bonded complexes of glycine by the maximum entropy method
    Choudhury, Rajul Ranjan
    Roussel, Pascal
    Capet, Frederic
    Chitra, R.
    JOURNAL OF MOLECULAR STRUCTURE, 2009, 938 (1-3) : 229 - 237
  • [34] Characterization of the charge ordering state by maximum entropy method
    Sanchez-Andujar, M.
    Castro-Couceiro, A.
    Senaris-Rodriguez, M. A.
    SOLID STATE COMMUNICATIONS, 2007, 141 (11) : 615 - 619
  • [35] Dysnomia, a computer program for maximum-entropy method (MEM) analysis and its performance in the MEM-based pattern fitting
    Momma, Koichi
    Ikeda, Takuji
    Belik, Alexei A.
    Izumi, Fujio
    POWDER DIFFRACTION, 2013, 28 (03) : 184 - 193
  • [36] ACCURATE STRUCTURE-ANALYSIS BY THE MAXIMUM-ENTROPY METHOD
    SAKATA, M
    SATO, M
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 1990, 46 : 263 - 270
  • [37] Charge density of hexagonal boron nitride using synchrotron radiation powder data by maximum entropy method
    Yamamura, S
    Takata, M
    Sakata, M
    JOURNAL OF PHYSICS AND CHEMISTRY OF SOLIDS, 1997, 58 (02) : 177 - 183
  • [38] Charge density distribution of the parent phase of a Cu-Al-Ni alloy by the maximum entropy method
    Kubota, Y
    Kagotani, T
    Kifune, K
    Tadaki, T
    Nishibori, E
    Takata, M
    Sakata, M
    Nakata, Y
    JAPAN INSTITUTE OF METALS, PROCEEDINGS, VOL 12, (JIMIC-3), PTS 1 AND 2: SOLID - SOLID PHASE TRANSFORMATIONS, 1999, : 871 - 874
  • [39] The maximum entropy method applied to stationary density computation
    Ding, Jiu
    Mead, Lawrence R.
    APPLIED MATHEMATICS AND COMPUTATION, 2007, 185 (01) : 658 - 666
  • [40] Quasiparticle density of states by inversion with maximum entropy method
    Sui, Xiao-Hong
    Wang, Han-Ting
    Tang, Hui
    Su, Zhao-Bin
    PHYSICAL REVIEW B, 2016, 94 (14)