QSAR modeling, molecular docking, ADMET prediction and molecular dynamics simulations of some 6-arylquinazolin-4-amine derivatives as DYRK1A inhibitors

被引:17
|
作者
Khamouli, Saida [1 ]
Belaidi, Salah [1 ]
Bakhouch, Mohamed [2 ,3 ]
Chtita, Samir [4 ]
Hashmi, Md Amiruddin [5 ]
Qais, Faizan Abul [6 ]
机构
[1] Univ Biskra, LMCE Lab, Grp Computat & Pharmaceut Chem, BP 145, Biskra 07000, Algeria
[2] Chouaib Doukkali Univ, Fac Sci, Dept Chem, Lab Bioorgan Chem, POB 24, M-24000 Jadida, Morocco
[3] Univ Sidi Mohamed Ben Abdellah, Fac Sci Dhar Mahraz, Engn Lab Organometall & Mol Mat & Environm, POB Atlas 1796, Fes 30000, Morocco
[4] Hassan II Univ Casablanca, Fac Sci Ben MSik, Lab Analyt & Mol Chem, Box 7955, Casablanca, Chile
[5] Aligarh Muslim Univ, Fac Life Sci, Interdisciplinary Biotechnol Unit, Aligarh 202002, Uttar Pradesh, India
[6] Aligarh Muslim Univ, Fac Agr Sci, Dept Agr Microbiol, Aligarh 202002, Uttar Pradesh, India
关键词
DYRK1A; 6-arylquinazolin-4-amine; QSAR; MolecularDocking; ADMET; Molecular dynamics; DRUG DISCOVERY; DOWN-SYNDROME; KINASES; DISEASE; SPECIFICITY; GROMACS; FAMILY; SERIES;
D O I
10.1016/j.molstruc.2022.132659
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Dual-specificity tyrosine phosphorylation-regulated kinase 1A (DYRK1A) is a protein kinase with diverse functions in neuronal development and adult brain physiology. QSAR study was performed for a diverse set of thirty-three6-arylquinazolin-4-amine derivatives as DYRK1A inhibitors. The QSAR model with HOMO, LUMO, qC(sub), SAG and MW descriptors showed satisfactory internal and external validation parameters (R-train(2) = 0.867,R-adj(2)= 0.831, Q(LOO)(2)= 0.755, F = 24 . 682 and R-pred (2)= 0.856). The excellent statistical results obtained for the developed model, strongly suggest that the model is reasonable for the prediction of the activity of new inhibitors. Therefore, we have designed several new potent DYRK1A inhibitors and validated their inhibitory activity by molecular docking methods using Autodock tools. Based in silico analysis, two novel compounds N2 and N11have been designed, which they have been identified hydrophobic and hydrogen bonds, with the binding pockets of active site4YLJ. Furthermore, the two newly designed compounds exhibited good ADMET properties, their molecular dynamics studies have shown a favorable energetic state and dynamic stability, characterized by root mean square deviation (RMSD), root mean square fluctuation (RMSF) and hydrogen bond. The outcomes of this study can be used to show the interest of DYRK1A inhibition for Alzheimer treatment. (C)& nbsp;2022 Published by Elsevier B.V.& nbsp;
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页数:15
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