Chronic obstructive pulmonary disease;
Genomewide association study;
Genomics;
Network medicine;
DIFFERENTIAL DNA METHYLATION;
GENE-EXPRESSION NETWORKS;
SET ENRICHMENT ANALYSIS;
SMALL AIRWAY EPITHELIUM;
LUNG-FUNCTION DECLINE;
BODY-MASS INDEX;
WIDE ASSOCIATION;
CIGARETTE-SMOKING;
FLOW OBSTRUCTION;
SERPINE2;
GENE;
D O I:
10.1016/j.bbrc.2014.07.086
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Chronic obstructive pulmonary disease (COPD) is a complex disease with both environmental and genetic determinants, the most important of which is cigarette smoking. There is marked heterogeneity in the development of COPD among persons with similar cigarette smoking histories, which is likely partially explained by genetic variation. Genomic approaches such as genomewide association studies and gene expression studies have been used to discover genes and molecular pathways involved in COPD pathogenesis; however, these "first generation" omics studies have limitations. Integrative genomic studies are emerging which can combine genomic datasets to further examine the molecular underpinnings of COPD. Future research in COPD genetics will likely use network-based approaches to integrate multiple genomic data types in order to model the complex molecular interactions involved in COPD pathogenesis. This article reviews the genomic research to date and offers a vision for the future of integrative genomic research in COPD. (C) 2014 Elsevier Inc. All rights reserved.
机构:
Univ Calif San Francisco, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USAUniv Calif San Francisco, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USA
Christenson, Stephanie A.
Smith, Benjamin M.
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机构:
Columbia Univ, Dept Med, Med Ctr, New York, NY USA
McGill Univ, Dept Med, Hlth Ctr, Montreal, PQ, CanadaUniv Calif San Francisco, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USA
Smith, Benjamin M.
Bafadhel, Mona
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机构:
Kings Coll London, Sch Immunol & Microbial Sci, Fac Life Sci & Med, London, England
Univ Oxford, Dept Resp Med, Nuffield Dept Med, Oxford, EnglandUniv Calif San Francisco, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USA
Bafadhel, Mona
Putcha, Nirupama
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机构:
Johns Hopkins Univ, Sch Med, Div Pulm & Crit Care Med, Baltimore, MD 21224 USAUniv Calif San Francisco, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USA
机构:
Duke Univ, Med Ctr, Dept Med, Div Pulm Allergy & Crit Care Med, Durham, NC 27710 USADuke Univ, Med Ctr, Dept Med, Div Pulm Allergy & Crit Care Med, Durham, NC 27710 USA