Investigation of a subset of human polymorphisms by ligase detection reaction and universal array

被引:0
|
作者
Consolandi, C
Bordoni, R
Castiglioni, B
Frosini, A
Mezzelani, A
Rizzi, E
Battaglia, C
Pera, C
Ferrara, GB
Zatta, P
Zambenedetti, P
Bernardi, LR
De Bellis, G
机构
[1] Univ Milan, Dept Biomed Sci & Technol, I-20133 Milan, Italy
[2] CNR, Inst Biomed Technol, Milan, Italy
[3] Natl Canc Inst, Inst Agr Biol & Biotechnol, Genoa, Italy
[4] Natl Canc Inst, Adv Biotechnol Ctr, Genoa, Italy
[5] Univ Genoa, Dept Oncol Biol & Genet, Genoa, Italy
[6] Gen Hosp, Encephalon Bank, Dolo Venice, Italy
关键词
polymorphism; ligase detection reaction; universal array;
D O I
暂无
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
We present our results in the identification of human polymorphisms within the 2(nd) exon of the HLA-A region, in the exon 4 of apolipoprotein E and in the exon 15 of the transferrin gene. Allele specific detection was performed by PCR followed by ligase detection reaction (LDR) in combination with a universal array, a powerful method for high throughput DNA sequence analysis. This work confirmed the results previously obtained by sequence or enzymatic analysis thus demonstrating the feasibility of genotyping studies by LDR using a universal DNA array.
引用
收藏
页码:259 / 263
页数:5
相关论文
共 50 条
  • [1] Detection of HLA polymorphisms by ligase detection reaction and a universal array format: A pilot study for low resolution genotyping
    Consolandi, C
    Busti, E
    Pera, C
    Delfino, L
    Ferrara, GB
    Bordoni, R
    Castiglioni, B
    Bernardi, LR
    Battaglia, C
    De Bellis, G
    HUMAN IMMUNOLOGY, 2003, 64 (01) : 168 - 178
  • [2] High taxonomic level fingerprint of the human intestinal microbiota by Ligase Detection Reaction - Universal Array approach
    Candela, Marco
    Consolandi, Clarissa
    Severgnini, Marco
    Biagi, Elena
    Castiglioni, Bianca
    Vitali, Beatrice
    De Bellis, Gianluca
    Brigidi, Patrizia
    BMC MICROBIOLOGY, 2010, 10
  • [3] High taxonomic level fingerprint of the human intestinal microbiota by Ligase Detection Reaction - Universal Array approach
    Marco Candela
    Clarissa Consolandi
    Marco Severgnini
    Elena Biagi
    Bianca Castiglioni
    Beatrice Vitali
    Gianluca De Bellis
    Patrizia Brigidi
    BMC Microbiology, 10
  • [4] Ligase detection reaction and universal array as a tool to detect grapevine infecting phytoplasmas
    Frosini, A
    Casati, P
    Bianco, PA
    Bordoni, R
    Consolandi, C
    Castiglioni, B
    Mezzelani, A
    Rizzi, E
    Battaglia, C
    Belli, G
    Bernardi, LR
    De Bellis, G
    MINERVA BIOTECNOLOGICA, 2002, 14 (3-4) : 265 - 267
  • [5] Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction)
    Busti, Elena
    Bordoni, Roberta
    Castiglioni, Bianca
    Monciardini, Paolo
    Sosio, Margherita
    Donadio, Stefano
    Consolandi, Clarissa
    Bernardi, Luigi Rossi
    Battaglia, Cristina
    De Bellis, Gianluca
    BMC MICROBIOLOGY, 2002, 2 (1) : 1 - 12
  • [6] Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction)
    Elena Busti
    Roberta Bordoni
    Bianca Castiglioni
    Paolo Monciardini
    Margherita Sosio
    Stefano Donadio
    Clarissa Consolandi
    Luigi Rossi Bernardi
    Cristina Battaglia
    Gianluca De Bellis
    BMC Microbiology, 2
  • [7] Ligase detection reaction (LDR) and universal array (Zip Code): application to DNA genotyping
    De Bellis, G
    Castiglioni, B
    Bordoni, R
    Mezzelani, A
    Rizzi, E
    Frosini, A
    Busti, E
    Consolandi, C
    Bernardi, LR
    Battaglia, C
    MINERVA BIOTECNOLOGICA, 2002, 14 (3-4) : 247 - 252
  • [8] Development of a PCR/Ligase Detection Reaction/Nanogold-Based Universal Array Approach for the Detection of Low-Abundant DNA Point Mutations
    Ping Yi
    Weiping Lu
    Jianxin Guo
    Qiang Liu
    Zhuqin Chen
    Jian Han
    Li Li
    Cell Biochemistry and Biophysics, 2011, 61 : 629 - 636
  • [9] Development of a PCR/Ligase Detection Reaction/Nanogold-Based Universal Array Approach for the Detection of Low-Abundant DNA Point Mutations
    Yi, Ping
    Lu, Weiping
    Guo, Jianxin
    Liu, Qiang
    Chen, Zhuqin
    Han, Jian
    Li, Li
    CELL BIOCHEMISTRY AND BIOPHYSICS, 2011, 61 (03) : 629 - 636
  • [10] A Typing System Based on Ligase Detection Reaction for Myogenin Gene Polymorphisms in Chicken
    Shu Jing-ting
    Zhang Ying
    Han Wei
    Yin Ping-An
    Li Hui-Fang
    JOURNAL OF ANIMAL AND VETERINARY ADVANCES, 2011, 10 (01): : 29 - 32