RNA-seq analysis of green tea polyphenols modulation of differently expressed genes in Enterococcus faecalis under low pH

被引:1
|
作者
Yan, Ruonan [1 ]
Zhou, Huan [2 ]
Zheng, Xiaojie [2 ]
Zhang, Xin [2 ]
机构
[1] Ningbo Univ, Dept Food Sci & Engn, Ningbo, Peoples R China
[2] Wenzhou Vocat Coll Sci & Technol, Dept Agr & Biotechnol, Wenzhouss 325006, Peoples R China
关键词
green tea polyphenols; Enterococcus faecalis; transcriptome; low pH stress; FAECIUM; VIRULENCE;
D O I
10.1111/lam.13686
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Enterococcus faecasslis (E. faecalis) is a resident bacterium in the host. The increase in internal stress like low pH may affect the biological effects of E. faecalis. The prebiotic-like function of tea polyphenols can enhance the beneficial effects of its tolerance to environmental stress. In this study, RNA-sequence analysis was used to explore the protective effect of green tea polyphenols (GTP) on E. faecalis under low pH stress. A total of 28 genes were found to be responsive to GTP under low pH stress, including 16 up-regulated and 12 down-regulated. GTP intervention can partly relieve some undesired negative influences, such as the down-regulation of the base excision repair gene and amino acid transport and metabolism gene. The significantly changes were associated with selenocompound metabolism and aminoacyl-tRNA biosynthesis after the intervention of GTP. The present study provided new insights into the growth and continuous adaptation of E. faecalis under stress.
引用
收藏
页码:970 / 980
页数:11
相关论文
共 50 条
  • [41] RNA-Seq Analysis Identifies Differentially Expressed Genes in the Longissimus dorsi of Wagyu and Chinese Red Steppe Cattle
    Li, Guanghui
    Yang, Runjun
    Lu, Xin
    Liu, Yue
    He, Wei
    Li, Yue
    Yu, Haibin
    Qin, Lihong
    Cao, Yang
    Zhao, Zhihui
    Fang, Xibi
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (01)
  • [42] Global analysis of differentially expressed genes between two Japonica rice varieties induced by low temperature during the booting stage by RNA-Seq
    Guo, Zhenhua
    Cai, Lijun
    Liu, Chuanxue
    Huang, Cuihong
    Chen, Zhiqiang
    Pan, Guojun
    Guo, Tao
    ROYAL SOCIETY OPEN SCIENCE, 2020, 7 (06):
  • [43] Analysis of differentially expressed genes and pathways associated with male sterility lines in watermelon via bulked segregant RNA-seq
    Wang, Yongqi
    Yang, Xiaozhen
    Yadav, Vivek
    Mo, Yanling
    Yang, Yongchao
    Zhang, Ruimin
    Wang, Zhongyuan
    Chang, Jingjing
    Li, Hao
    Zhang, Yong
    Ma, Jianxiang
    Wei, Chunhua
    Zhang, Xian
    3 BIOTECH, 2020, 10 (05)
  • [44] Identification of candidate genes controlling cucumber hypocotyl elongation under low light stress based on BSA-seq and RNA-seq
    Chen, Lin
    Meng, Haoyuan
    Chen, Baoying
    Xie, Shuyan
    Liu, Wenrui
    Wang, Min
    Yan, Jinqiang
    Cai, Jinsen
    Yang, Songguang
    Jiang, Biao
    Peng, Qingwu
    Lin, Yu'e
    SCIENTIA HORTICULTURAE, 2024, 337
  • [45] Identification of key differentially expressed genes and gene mutations in breast ductal carcinoma in situ using RNA-seq analysis
    Zhu, Congyuan
    Hu, Hao
    Li, Jianping
    Wang, Jingli
    Wang, Ke
    Sun, Jingqiu
    WORLD JOURNAL OF SURGICAL ONCOLOGY, 2020, 18 (01)
  • [46] Analysis of differentially expressed genes and pathways associated with male sterility lines in watermelon via bulked segregant RNA-seq
    Yongqi Wang
    Xiaozhen Yang
    Vivek Yadav
    Yanling Mo
    Yongchao Yang
    Ruimin Zhang
    Zhongyuan Wang
    Jingjing Chang
    Hao Li
    Yong Zhang
    Jianxiang Ma
    Chunhua Wei
    Xian Zhang
    3 Biotech, 2020, 10
  • [47] IDENTIFICATION OF DIFFERENTIALLY EXPRESSED GENES OF SORGHUM [SORGHUM BICOLOR (L.) MOENCH] SEEDLINGS UNDER NITROGEN STRESS BY RNA-SEQ
    Yang, G. D.
    Zhou, Y. F.
    Huang, R. D.
    Lin, F.
    Hu, Z. Y.
    Hao, Z. Y.
    Liang, C. B.
    Wang, Q.
    Meng, X. X.
    Dong, L. D.
    APPLIED ECOLOGY AND ENVIRONMENTAL RESEARCH, 2019, 17 (05): : 11525 - 11536
  • [48] A Class-Information-Based Sparse Component Analysis Method to Identify Differentially Expressed Genes on RNA-Seq Data
    Liu, Jin-Xing
    Xu, Yong
    Gao, Ying-Lian
    Zheng, Chun-Hou
    Wang, Dong
    Zhu, Qi
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2016, 13 (02) : 392 - 398
  • [49] RNA-Seq analysis of differentially expressed genes relevant to mismatch repair in aging hematopoietic stem-progenitor cells
    Lian, Xiaolan
    Dong, Yongpin
    Zhao, Mingyi
    Liang, Yajie
    Jiang, Weiwei
    Li, Wenfang
    Zhang, Lina
    JOURNAL OF CELLULAR BIOCHEMISTRY, 2019, 120 (07) : 11401 - 11408
  • [50] Identification of key differentially expressed genes and gene mutations in breast ductal carcinoma in situ using RNA-seq analysis
    Congyuan Zhu
    Hao Hu
    Jianping Li
    Jingli Wang
    Ke Wang
    Jingqiu Sun
    World Journal of Surgical Oncology, 18