Particle-Based Methods for Multiscale Modeling of Blood Flow in the Circulation and in Devices: Challenges and Future Directions

被引:42
|
作者
Yamaguchi, Takami [2 ]
Ishikawa, Takuji [3 ]
Imai, Y. [3 ]
Matsuki, N. [2 ]
Xenos, Mikhail [1 ]
Deng, Yuefan [4 ]
Bluestein, Danny [1 ]
机构
[1] SUNY Stony Brook, Dept Biomed Engn, Stony Brook, NY 11794 USA
[2] Tohoku Univ, Dept Biomed Engn, Sendai, Miyagi 980, Japan
[3] Tohoku Univ, Dept Bioengn, Sendai, Miyagi 980, Japan
[4] SUNY Stony Brook, Dept Appl Math, Stony Brook, NY 11794 USA
关键词
Multiscale modeling; Numerical methods; Particle dynamics; DPD; Blood flow; Devices; Clotting; Platelets; PARALLEL MOLECULAR-DYNAMICS; VON-WILLEBRAND-FACTOR; NUMERICAL-SIMULATION; COMPUTER-SIMULATION; TRANSPORT PROCESSES; BOUNDARY-CONDITIONS; CAPILLARY VESSELS; ELEMENT-METHOD; POROUS-MEDIA; CELL MOTION;
D O I
10.1007/s10439-010-9904-x
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
A major computational challenge for a multiscale modeling is the coupling of disparate length and timescales between molecular mechanics and macroscopic transport, spanning the spatial and temporal scales characterizing the complex processes taking place in flow-induced blood clotting. Flow and pressure effects on a cell-like platelet can be well represented by a continuum mechanics model down to the order of the micrometer level. However, the molecular effects of adhesion/aggregation bonds are on the order of nanometer. A successful multiscale model of platelet response to flow stresses in devices and the ensuing clotting responses should be able to characterize the clotting reactions and their interactions with the flow. This paper attempts to describe a few of the computational methods that were developed in recent years and became available to researchers in the field. They differ from traditional approaches that dominate the field by expanding on prevailing continuum-based approaches, or by completely departing from them, yielding an expanding toolkit that may facilitate further elucidation of the underlying mechanisms of blood flow and the cellular response to it. We offer a paradigm shift by adopting a multidisciplinary approach with fluid dynamics simulations coupled to biophysical and biochemical transport.
引用
收藏
页码:1225 / 1235
页数:11
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    [J]. TEXTILE RESEARCH JOURNAL, 2006, 76 (09) : 712 - 719
  • [22] Adaptive fused visualization for large-scale blood flow dataset with particle-based rendering
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  • [23] Adaptive fused visualization for large-scale blood flow dataset with particle-based rendering
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  • [27] Profit-based unit commitment problem: A review of models, methods, challenges, and future directions
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    [J]. PHARMACEUTICS, 2024, 16 (04)
  • [30] Papillomavirus virus like particle-based therapeutic vaccine against human papillomavirus infection related diseases: Immunological problems and future directions
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    [J]. CELLULAR IMMUNOLOGY, 2011, 269 (01) : 5 - 9