Peribacillus faecalis sp. nov., a moderately halophilic bacterium isolated from the faeces of a cow

被引:4
|
作者
Jiang, Lingmin [1 ]
Jung, Won Yong [2 ]
Li, Zhun [1 ]
Lee, Mi-Kyung [1 ]
Park, Seung-Hwan [1 ]
Kang, Se Won [1 ]
Lee, Jung-Sook [1 ]
Jung, Hyunjung [3 ]
Hur, Tai-Young [4 ]
Kim, Hyeun Bum [5 ]
Kim, Jae-Kyung [6 ]
Lee, Ju-Hoon [7 ]
Lee, Ju Huck [1 ]
Lee, Jiyoung [1 ]
机构
[1] Korea Res Inst Biosci & Biotechnol, Biol Resource Ctr, Korean Collect Type Cultures KCTC, Jeongeup 56212, South Korea
[2] Korea Res Inst Biosci & Biotechnol, Korean Bioinformat Ctr KOBIC, Daejeon 34141, South Korea
[3] Natl Inst Anim Sci, Swine Sci Div, Cheonan 31000, South Korea
[4] Natl Inst Anim Sci, Div Anim Dis & Hlth, Wanju Gun 55365, South Korea
[5] Dankook Univ, Dept Anim Resources Sci, Cheonan 3116, South Korea
[6] Korea Atom Energy Res Inst, Adv Radiat Technol Inst, Jeongeup 56212, South Korea
[7] Seoul Natl Univ, Ctr Food & Bioconvergence, Dept Food & Anim Biotechnol, Dept Agr Biotechnol, Seoul 08826, South Korea
基金
新加坡国家研究基金会;
关键词
polyphasic taxonomy; novel species; phylogeny; Peribacillus faecalis sp. nov; BACILLUS; SOIL; DEMARCATION;
D O I
10.1099/ijsem.0.004721
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain-positive, facultatively anaerobic, endospore-forming, rod-shaped strain, AGMB 02131(T), which grew at 20?40 ?C (optimum 30 degrees C), pH 3.0?11.0 (optimum pH 4.0) and in the presence of 0?18 % (w/v) NaCl (optimum 10 %), was isolated from a cow faecal sample and identified as a novel strain using a polyphasic taxonomic approach. The phylogenetic analysis based on 16S rRNA gene sequences along with the whole genome (92 core gene sets) revealed that AGMB 02131T formed a group within the genus Peribacillus, and showed the highest sequence similarity with Peribacillus endoradicis DSM 28131(T) (96.9 %), following by Peribacillus butanolivorans DSM 18926T (96.6 %). The genome of AGMB 02131T comprised 70 contigs, the chromosome length was 4 038 965 bp and it had a 38.5 % DNA G+C content. Digital DNA?DNA hybridization revealed that AGMB 02131(T) displayed 21.4 % genomic DNA relatedness with the most closely related strain, P. butanolivorans DSM 18926T. AGMB 02131(T) contains all of the conserved signature indels that are specific for members of the genus Peribacillus. The major cellular fatty acids (>10 %) of AGMB 02131(T) were C-18.1 omega 9c, C-18.0 and C-16.0. The major polar lipids present were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. On the basis of the phenotypic, phylogenetic, genomic and chemotaxonomic features, AGMB 02131(T) represents a novel species of the genus Peribacillus, for which the name Peribacillus faecalis sp. nov. is proposed. The type strain is AGMB 02131T (=KCTC 43221(T)=CCTCC AB 2020077(T)).
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页数:8
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