Identification, Characterization, and Application of a Highly Sensitive Lactam Biosensor from Pseudomonas putida

被引:26
|
作者
Thompson, Mitchell G. [1 ,2 ,3 ]
Pearson, Allison N. [1 ,2 ]
Barajas, Jesus F. [2 ,4 ]
Cruz-Morales, Pablo [1 ,2 ,5 ]
Sedaghatian, Nima [1 ,2 ]
Costello, Zak [1 ,2 ,4 ]
Garber, Megan E. [1 ,2 ,6 ]
Incha, Matthew R. [1 ,2 ]
Valencia, Luis E. [1 ,2 ,7 ]
Baidoo, Edward E. K. [1 ,2 ]
Garcia Martin, Hector [1 ,2 ,4 ,8 ]
Mukhopadhyay, Aindrila [1 ,2 ,6 ]
Keasling, Jay D. [1 ,2 ,7 ,9 ,10 ,11 ]
机构
[1] Joint BioEnergy Inst, Emeryville, CA 94608 USA
[2] Lawrence Berkeley Natl Lab, Biol Syst & Engn Div, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
[4] Agile BioFoundry, Dept Energy, Emeryville, CA 94608 USA
[5] Inst Tecnol & Estudios Super Monterrey, Ctr Biotecnol FEMSA, Monterrey 64849, Mexico
[6] Univ Calif Berkeley, Comparat Biochem Grad Grp, Berkeley, CA 94720 USA
[7] Univ Calif Berkeley, Joint Program Bioengn, Berkeley, CA 94720 USA
[8] Basque Ctr Appl Math, BCAM, Bilbao, Spain
[9] Univ Calif Berkeley, Dept Chem & Biomol Engn, Berkeley, CA 94720 USA
[10] Tech Univ Denmark, Ctr Biosustainabil, Novo Nordisk Fdn, Lyngby, Denmark
[11] Shenzhen Inst Adv Technol, Inst Synthet Biol, Ctr Synthet Biochem, Shenzhen 518055, Peoples R China
来源
ACS SYNTHETIC BIOLOGY | 2020年 / 9卷 / 01期
关键词
ESCHERICHIA-COLI; DNA; PROTEIN; DESIGN; CHNR;
D O I
10.1021/acssynbio.9b00292
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Caprolactam is an important polymer precursor to nylon traditionally derived from petroleum and produced on a scale of 5 million tons per year. Current biological pathways for the production of caprolactam are inefficient with titers not exceeding 2 mg/L, necessitating novel pathways for its production. As development of novel metabolic routes often require thousands of designs and result in low product titers, a highly sensitive biosensor for the final product has the potential to rapidly speed up development times. Here we report a highly sensitive biosensor for valerolactam and caprolactam from Pseudomonas putida KT2440 which is >1000X more sensitive to an exogenous ligand than previously reported sensors. Manipulating the expression of the sensor oplR (PP_3516) substantially altered the sensing parameters, with various vectors showing K-d values ranging from 700 nM (79.1 mu g/L) to 1.2 mM (135.6 mg/L). Our most sensitive construct was able to detect in vivo production of caprolactam above background at similar to 6 mu g/L. The high sensitivity and range of OplR is a powerful tool toward the development of novel routes to the biological synthesis of caprolactam.
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页码:53 / 62
页数:19
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