Geometry optimizations with the incremental molecular fragmentation method

被引:7
|
作者
Meitei, Oinam Romesh [1 ]
Hesselmann, Andreas [1 ]
机构
[1] Friedrich Alexander Univ Erlangen Nurnberg, Dept Chem & Pharm, Lehrstuhl Theoret Chem, Egerlandstr 3, D-91058 Erlangen, Germany
来源
关键词
Molecular fragmentation; geometry optimization; polypeptide; QUANTUM-MECHANICAL CALCULATION; BASIS-SET CONVERGENCE; MANY-BODY EXPANSION; CORRELATED CALCULATIONS; ACCURATE CALCULATIONS; CONJUGATE CAPS; ENERGY; EFFICIENT; IMPLEMENTATION; ELECTRON;
D O I
10.1142/S0219633618500372
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Nuclear energy gradients for the incremental molecular fragmentation (IMF) method presented in our previous work [Meitei OR, HeBelmann A, Molecular energies from an incremental fragmentation method, J Chem Phys 144(8):084109, 2016] have been derived. Using the secondorder Moller-Plesset perturbation theory method to describe the bonded and nonbonded energy and gradient contributions and the uncorrelated Hartree-Fock method to describe the correction increment, it is shown that the IMF gradient can be easily computed by a sum of the underlying individual derivatives of the energy contributions. The performance of the method has been compared against the supermolecular method by optimizing the structures of a range of polyglycine molecules with up to 36 glycine residues in the chain. It is shown that with a sensible set of parameters used in the fragmentation the supermolecular structures can be fairly well reproduced. In a few cases the optimization with the IMF method leads to structures that differ from the supermolecular ones. It was found, however, that these are more stable geometries also on the supermolecular potential energy surface.
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页数:39
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