Identification of genes and signaling pathways associated with the pathogenesis of juvenile spondyloarthritis

被引:9
|
作者
Wang, Zhe [1 ,2 ]
Han, Yudi [3 ]
Zhang, Zhaoqing [4 ]
Jia, Cunfeng [4 ]
Zhao, Qiang [4 ]
Song, Wei [5 ]
Chen, Tao [6 ]
Zhang, Yifan [7 ]
Wang, Xiuhui [8 ]
机构
[1] Fudan Univ, Zhongshan Hosp, Dept Orthoped, Shanghai 200032, Peoples R China
[2] Dalian Med Univ, Affiliated Hosp 1, Dept Orthoped Trauma, Dalian 116011, Liaoning, Peoples R China
[3] Chinese Peoples Liberat Army, Dept Plast & Reconstruct Surg, Gen Hosp, Beijing 100853, Peoples R China
[4] Zhangqiu Peoples Hosp, Dept Spine Surg, Jinan 250200, Shandong, Peoples R China
[5] Shanghai Univ, Sch Life Sci, Shanghai 200444, Peoples R China
[6] Fourth Hosp Changsha, Dept Orthoped, Changsha 410006, Hunan, Peoples R China
[7] Peoples Liberat Army, Dept Rheumatism Immun, Gen Hosp, Beijing 100700, Peoples R China
[8] Shanghai Zhoupu Hosp, Dept Orthoped, 1500 Zhouyuan Rd, Shanghai 201318, Peoples R China
关键词
differentially expressed genes; juvenile spondyloarthritis; mitogen-activated protein kinase 1 signaling pathway; inflammation; PROTEIN-INTERACTION NETWORKS; DOUBLE-BLIND; ARTHRITIS; METHOTREXATE; APOPTOSIS; SOFTWARE; DISEASE; BNIP3L; TRIAL;
D O I
10.3892/mmr.2018.9136
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
The aim of the present study was to identify key genes and signaling pathways associated with the pathogenesis of juvenile spondyloarthritis (JSA). The gene expression profile dataset GSE58667, including data from 15 human whole blood samples collected from 11 patients with JSA and four healthy controls, was analyzed to identify differentially expressed genes (DEGs) associated with disease characteristics. Additionally, Gene Ontology term and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses of the DEGs were performed. Protein-protein, microRNA-transcription factor and chemical-gene interaction networks were constructed. A total of 326 DEGs, 196 upregulated and 130 downregulated, were identified. DEGs, including C-X-C motif chemokine ligand 5 (CXCL5), BCL2 interacting protein 3 like (BNIP3L), dual specificity phosphatase 5 (DUSP5) and tumor protein p53 (TP53) were enriched in functions associated with apoptosis, the cell cycle and immune responses. KEGG pathway enrichment analysis revealed that pathways associated with inflammation and the mitogen-activated protein kinase 1 (MAPK) signaling pathway were the most enriched by DEGs. The results of the present study indicated that the MAPK signaling pathway and four genes, including CXCL5, BNIP3L, DUSP5 and TP53, may be implicated in the pathogenesis of JSA.
引用
收藏
页码:1263 / 1270
页数:8
相关论文
共 50 条
  • [21] Identification of Chondrocyte Genes and Signaling Pathways in Response to Acute Joint Inflammation
    Mengxi Lv
    Yilu Zhou
    Shawn W. Polson
    Leo Q. Wan
    Meiqing Wang
    Lin Han
    Liyun Wang
    X. Lucas Lu
    Scientific Reports, 9
  • [22] Identification of Chondrocyte Genes and Signaling Pathways in Response to Acute Joint Inflammation
    Lv, Mengxi
    Zhou, Yilu
    Polson, Shawn W.
    Wan, Leo Q.
    Wang, Meiqing
    Han, Lin
    Wang, Liyun
    Lu, X. Lucas
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [23] Identification of genes and signaling pathways associated with diabetic neuropathy using a weighted correlation network analysis A consort study
    Li, Ya
    Ma, Weiguo
    Xie, Chuanqing
    Zhang, Min
    Yin, Xiaohong
    Wang, Fenfen
    Xu, Jie
    Shi, Bingyin
    MEDICINE, 2016, 95 (47)
  • [24] Identification of signaling pathways associated with cancer protection in Laron syndrome
    Lapkina-Gendler, Lena
    Rotem, Itai
    Pasmanik-Chor, Metsada
    Gurwitz, David
    Sarfstein, Rive
    Laron, Zvi
    Werner, Haim
    ENDOCRINE-RELATED CANCER, 2016, 23 (05) : 399 - 410
  • [25] Identification of genes and pathways associated with endometriosis using bioinformatic analysis
    Huang, Yaxiong
    Zhang, Yuanzhen
    Li, Bin
    Ke, Lina
    INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE, 2020, 13 (09): : 6626 - 6634
  • [26] Identification of Key Genes and Pathways Associated with Oxidative Stress in Periodontitis
    Zhang, Zheng
    Zheng, Youli
    Bian, Xiaowei
    Wang, Minghui
    Chou, Jiashu
    Liu, Haifeng
    Wang, Zuomin
    OXIDATIVE MEDICINE AND CELLULAR LONGEVITY, 2022, 2022
  • [27] Bioinformatics identification of crucial genes and pathways associated with hepatocellular carcinoma
    Gao, Xueren
    Wang, Xixi
    Zhang, Shulong
    BIOSCIENCE REPORTS, 2018, 38
  • [28] Identification of vital genes and pathways associated with mucosal melanoma in Chinese
    Du, Mingzhan
    Wang, Yuhong
    Gu, Dongmei
    Guo, Lingchuan
    ANNALS OF DIAGNOSTIC PATHOLOGY, 2021, 50
  • [29] Identification of key genes and pathways associated with spinal cord injury
    Zhang, Yue-Hui
    Song, Jia
    Wang, Li-Gang
    Shao, Jiang
    MOLECULAR MEDICINE REPORTS, 2017, 15 (04) : 1577 - 1584
  • [30] Identification of key genes and pathways associated with diabetes of the exocrine pancreas
    Yang, Zheng
    Li, Shengqi
    Liu, Huaying
    Su, Qisheng
    Li, Xiaohong
    Qiu, Yulin
    Mo, Wuning
    MEDICINE, 2022, 101 (34) : E29781