CRISPR-P: A Web Tool for Synthetic Single-Guide RNA Design of CRISPR-System in Plants

被引：501
|
作者：
Lei, Yang [1 ,2 ]
Lu, Li [1 ,2 ]
Liu, Hai-Yang [1 ]
Li, Sen [1 ,2 ]
Xing, Feng [1 ,2 ]
Chen, Ling-Ling [1 ,2 ]
机构：
[1] Huazhong Agr Univ, Coll Life Sci & Technol, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Peoples R China
[2] Huazhong Agr Univ, Ctr Bioinformat, Wuhan 430070, Peoples R China
来源：
MOLECULAR PLANT | 2014年 / 7卷 / 09期
关键词：
CAS9;
D O I：
10.1093/mp/ssu044
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
引用
收藏
页码：1494 / 1496
页数：3
相关论文
共 33 条
  • [1] CRISPR-P 2.0: An Improved CRISPR-Cas9 Tool for Genome Editing in Plants
    Liu, Hao
    Ding, Yuduan
    Zhou, Yanqing
    Jin, Wenqi
    Xie, Kabin
    Chen, Ling-Ling
    [J]. MOLECULAR PLANT, 2017, 10 (03) : 530 - 532
  • [2] CRISPR-Local: a local single-guide RNA (sgRNA) design tool for non-reference plant genomes
    Sun, Jiamin
    Liu, Hao
    Liu, Jianxiao
    Cheng, Shikun
    Peng, Yong
    Zhang, Qinghua
    Yan, Jianbing
    Liu, Hai-Jun
    Chen, Ling-Ling
    [J]. BIOINFORMATICS, 2019, 35 (14) : 2501 - 2503
  • [3] CRISPRlnc: a machine learning method for lncRNA-specific single-guide RNA design of CRISPR/Cas9 system
    Yang, Zitian
    Zhang, Zexin
    Li, Jing
    Chen, Wen
    Liu, Changning
    [J]. BRIEFINGS IN BIOINFORMATICS, 2024, 25 (02)
  • [4] CRISPR MultiTargeter: A Web Tool to Find Common and Unique CRISPR Single Guide RNA Targets in a Set of Similar Sequences
    Prykhozhij, Sergey V.
    Rajan, Vinothkumar
    Gaston, Daniel
    Berman, Jason N.
    [J]. PLOS ONE, 2015, 10 (03):
  • [5] CRISPR/Cas Genome Editing Single Guide RNA (sgRNA) Design using Three Different Web Tool Platforms
    Reddy, Rajith
    Ekambaram, B.
    Laxmi, P. Jaya
    Harikrishna, CH.
    Bhattacharya, T. K.
    Sushma, G.
    [J]. INDIAN JOURNAL OF ANIMAL RESEARCH, 2024, 58 (01) : 13 - 20
  • [6] A natural single-guide RNA repurposes Cas9 to autoregulate CRISPR-Cas expression
    Workman, Rachael E.
    Pammi, Teja
    Nguyen, Binh T. K.
    Graeff, Leonardo W.
    Smith, Erika
    Sebald, Suzanne M.
    Stoltzfus, Marie J.
    Euler, Chad W.
    Modell, Joshua W.
    [J]. CELL, 2021, 184 (03) : 675 - +
  • [7] Efficient CRISPR/Cas9-Mediated Genome Editing Using a Chimeric Single-Guide RNA Molecule
    Butt, Haroon
    Eid, Ayman
    Ali, Zahir
    Atia, Mohamed A. M.
    Mokhtar, Morad M.
    Hassan, Norhan
    Lee, Ciaran M.
    Bao, Gang
    Mahfouz, Magdy M.
    [J]. FRONTIERS IN PLANT SCIENCE, 2017, 8
  • [8] GuideScan software for improved single and paired CRISPR guide RNA design
    Perez, Alexendar R.
    Pritykin, Yuri
    Vidigal, Joana A.
    Chhangawala, Sagar
    Zamparo, Lee
    Leslie, Christina S.
    Ventura, Andrea
    [J]. NATURE BIOTECHNOLOGY, 2017, 35 (04) : 347 - +
  • [9] GuideScan software for improved single and paired CRISPR guide RNA design
    Alexendar R Perez
    Yuri Pritykin
    Joana A Vidigal
    Sagar Chhangawala
    Lee Zamparo
    Christina S Leslie
    Andrea Ventura
    [J]. Nature Biotechnology, 2017, 35 : 347 - 349
  • [10] EuPaGDT: a web tool tailored to design CRISPR guide RNAs for eukaryotic pathogens
    Peng, Duo
    Tarleton, Rick
    [J]. MICROBIAL GENOMICS, 2015, 1 (04):
1234