Uncovering the roles of rare variants in common disease through whole-genome sequencing

被引:813
|
作者
Cirulli, Elizabeth T. [1 ]
Goldstein, David B. [1 ]
机构
[1] Duke Univ, Sch Med, Ctr Human Genome Variat, Durham, NC 27708 USA
基金
美国国家卫生研究院;
关键词
WIDE ASSOCIATION SCAN; CHRONIC HEPATITIS-C; MACULAR DEGENERATION; COLORECTAL-CANCER; GENETIC-VARIATION; COMPLEX DISEASES; ABACAVIR HYPERSENSITIVITY; MISSING HERITABILITY; STRUCTURAL VARIATION; SUSCEPTIBILITY LOCI;
D O I
10.1038/nrg2779
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Although genome-wide association (GWA) studies for common variants have thus far succeeded in explaining only a modest fraction of the genetic components of human common diseases, recent advances in next-generation sequencing technologies could rapidly facilitate substantial progress. This outcome is expected if much of the missing genetic control is due to gene variants that are too rare to be picked up by GWA studies and have relatively large effects on risk. Here, we evaluate the evidence for an important role of rare gene variants of major effect in common diseases and outline discovery strategies for their identification.
引用
收藏
页码:415 / 425
页数:11
相关论文
共 50 条
  • [21] Whole-genome sequencing analysis of structural variants in oesophageal adenocarcinoma
    Contino, Gianmarco
    Secrier, Maria
    Edward, Paul A. W.
    Fitzgerald, Rebecca
    [J]. LANCET, 2017, 389 : 34 - 34
  • [22] Uncovering the genetic diversity and adaptability of Butuo Black Sheep through whole-genome re-sequencing
    Huang, Zengwen
    Wang, Jing
    Qi, Dongming
    Li, Xiaoyan
    Wang, Jinkang
    Zhou, Jingwen
    Ruan, Yan
    Laer, Youse
    Baqian, Zhangjia
    Yang, Chaoyun
    [J]. PLOS ONE, 2024, 19 (06):
  • [23] Sizing up whole-genome sequencing studies of common diseases
    Wray, Naomi R.
    Gratten, Jacob
    [J]. NATURE GENETICS, 2018, 50 (05) : 635 - 637
  • [24] Sizing up whole-genome sequencing studies of common diseases
    Naomi R. Wray
    Jacob Gratten
    [J]. Nature Genetics, 2018, 50 : 635 - 637
  • [25] Linked-read whole-genome sequencing resolves common and private structural variants in multiple myeloma
    Pena-Perez, Lucia
    Frengen, Nicolai
    Hauenstein, Julia
    Gran, Charlotte
    Gustafsson, Charlotte
    Eisfeldt, Jesper
    Kierczak, Marcin
    Taborsak-Lines, Fanny
    Olsen, Remi-Andre
    Wallblom, Ann
    Krstic, Aleksandra
    Ewels, Philip
    Lindstrand, Anna
    Mansson, Robert
    [J]. BLOOD ADVANCES, 2022, 6 (17) : 5009 - 5023
  • [26] Use of Whole-Genome Sequencing for Mitochondrial Disease Diagnosis
    Davis, Ryan L.
    Kumar, Kishore R.
    Puttick, Clare
    Liang, Christina
    Ahmad, Kate E.
    Edema-Hildebrand, Fabienne
    Park, Jin-Sung
    Minoche, Andre E.
    Gayevskiy, Velimir
    Mallawaarachchi, Amali C.
    Christodoulou, John
    Schofield, Deborah
    Dinger, Marcel E.
    Cowley, Mark J.
    Sue, Carolyn M.
    [J]. NEUROLOGY, 2022, 99 (07) : E730 - E742
  • [27] Whole-genome sequencing in familial Parkinson's disease
    Ross, O. A.
    Soto-Ortolaza, A. I.
    Rayaprolu, S.
    Strongosky, A.
    Dickson, D. W.
    Wszolek, Z. K.
    [J]. MOVEMENT DISORDERS, 2012, 27 : S467 - S467
  • [28] Development and Validation of Clinical Whole-Exome and Whole-Genome Sequencing for Detection of Germline Variants in Inherited Disease
    Hegde, Madhuri
    Santani, Avni
    Mao, Rong
    Ferreira-Gonzalez, Andrea
    Weck, Karen E.
    Voelkerding, Karl V.
    [J]. ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE, 2017, 141 (06) : 798 - 805
  • [29] Whole-genome sequencing and disease-gene detection
    Lynn B Jorde
    [J]. BMC Proceedings, 6 (Suppl 6)
  • [30] Interpreting Whole-Genome Sequencing
    Grody, Wayne W.
    Vilain, Eric
    Nelson, Stanley F.
    [J]. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2014, 312 (03): : 296 - 296