Complete genome sequence of opine-utilizing Variovorax sp strain PAMC28711 isolated from an Antarctic lichen

被引：6

作者：

Han, So-Ra ^{[1
]}

Lee, Joo-Ho ^{[1
]}

Kang, Seunghyun ^{[2
]}

Park, Hyun ^{[2
,3
]}

Oh, Tae-Jin ^{[1
]}

机构：

[1] SunMoon Univ, Dept BT Convergent Pharmaceut Engn, 100 Kalsan Ri, Asan 31460, Chungnam, South Korea

[2] Korea Polar Res Inst KOPRI, 213-3 Songdo Dong, Inchon 21990, South Korea

[3] Univ Sci & Technol, Polar Sci, Daejeon 34113, South Korea

来源：

JOURNAL OF BIOTECHNOLOGY | 2016年 / 225卷

关键词：

Variovorax sp PAMC28711; Complete genome sequence; Opine; Octopine; Antarctica lichen Himantormia sp; CATABOLISM;

D O I：

10.1016/j.jbiotec.2016.03.042

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

We report the complete genome sequence of Variovorax sp. strain PAMC28711 isolated from the Antarctic lichen Himantormia sp. Whole genome sequencing revealed opine oxidase- and octopine dehydrogenase-related gene clusters that are involved in octopine utilization. These data will lead to future genetic and biochemical studies on the unusual catabolic traits of opine and octopine utilization in extremely cold environments. (C) 2016 Elsevier B.V. All rights reserved.

引用

页码：46 / 47

页数：2

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