Machine-Learned Coarse-Grained Models

被引:50
|
作者
Bejagam, Karteek K. [1 ]
Singh, Samrendra [2 ]
An, Yaxin [1 ]
Deshmukh, Sanket A. [1 ]
机构
[1] Virginia Tech, Dept Chem Engn, Blacksburg, VA 24061 USA
[2] CNH Ind, Burr Ridge, IL 60527 USA
来源
关键词
GLASS-TRANSITION TEMPERATURE; FORCE-FIELD PARAMETERS; NEURAL-NETWORK; MOLECULAR-DYNAMICS; PREDICTION; POLYMERS; OPTIMIZATION;
D O I
10.1021/acs.jpclett.8b01416
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Optimizing force-field (FF) parameters to perform molecular dynamics (MD) simulations is a challenging and time-consuming process. We present a novel FF optimization framework that integrates MD simulations with particle swarm optimization (PSO) algorithm and artificial neural network (ANN). This new ANN-assisted PSO framework was used to develop transferable coarse-grained (CG) models for D2O and DMF as a proof of concept. The PSO algorithm was used to generate the set of input FF parameters for the MD simulations of the CG models of these solvents, which were optimized to reproduce their experimental properties. Herein, for the first time, a reverse approach was employed for on-the-fly training of the ANN model, where results (solvent properties) obtained from the MD simulations and their corresponding FF parameters were used as inputs and outputs, respectively. The ANN model was then required to predict a set of new FF parameters, which were tested for their ability to predict the desired experimental properties. This new framework can be extended to integrate any optimization algorithm with ANN and MD simulations to accelerate the FF development.
引用
收藏
页码:4667 / 4672
页数:11
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