Mitochondrial genome of Argopecten irradians reveals higher-level phylogenetic relationships in Anisomyaria

被引:3
|
作者
Xin, Zhao-Zhe [1 ,2 ,3 ]
Liu, Yu [1 ,3 ]
Li, Chao-Feng [1 ]
Zhang, Dai-Zhen [1 ]
Jiang, Sen-Hao [1 ]
Zhang, Hua-Bin [1 ]
Zhou, Chun -Lin [1 ]
Tang, Bo -Ping [1 ]
Liu, Qiu-Ning [1 ]
Dai, Li -Shang [2 ]
机构
[1] Yancheng Teachers Univ, Jiangsu Synthet Innovat Ctr Coastal Bioagr, Jiangsu Prov Key Lab Coastal Wetland Bioresources, Jiangsu Key Lab Bioresources Saline Soils,Sch Oce, Yancheng 224007, Peoples R China
[2] Wenzhou Med Univ, Sch Pharmaceut Sci, Wenzhou 325035, Peoples R China
[3] Nanjing Univ Technol, Coll Biotechnol & Pharmaceut Engn, Nanjing 210009, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
Argopecten irradians; Mitochondrial genome; Phylogenetic analysis; PECTINIDAE MOLLUSCA; SEQUENCES; BIVALVIA; DNA; EVOLUTION; SELECTION; MAPS;
D O I
10.1016/j.ijbiomac.2018.06.008
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The complete mitochondria! genome of Argopecten irradians strain Zhongkehong was sequenced and annotated: it is 16,212 bp in length and contains twelve protein-coding genes (atp8 is absent, as in most species in Anisomyaria), two ribosomal RNA genes, and 21 transfer RNA genes (trnS is absent and there are two copies of trnF). The heavy strand has an overall A + T content of 57.3%; GC and AT skews are 0249 and -0.262, respectively, indicating more Gs and more Ts than Cs and As. Phylogenetic analysis based on Bayesian Inference and Maximum Likelihood of the twelve protein-coding genes shows that A. irradians has close relationships with A. purpuratus and A. ventricosus; this indicated that A. irradians belongs to the Pectinidae family. The Pectinidae was sister to (Ostreidae + Mytilidae). This work provides general information on the evolution of cultured scallops. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:1089 / 1092
页数:4
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