Rapid Identification and Differentiation of Mycobacterium avium Subspecies paratuberculosis Types by Use of Real-Time PCR and High-Resolution Melt Analysis of the MAP1506 Locus
被引:11
|
作者:
Castellanos, Elena
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机构:
Univ Complutense Madrid, Ctr Vigilancia Sanitaria Vet, VISAVET, E-28040 Madrid, Spain
Univ Complutense Madrid, Fac Vet, Dept Sanidad Anim, E-28040 Madrid, SpainUniv Calgary, Dept Prod Anim Hlth, Fac Vet Med, Calgary, AB T2N 4N1, Canada
Castellanos, Elena
[2
,3
]
Aranaz, Alicia
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机构:
Univ Complutense Madrid, Ctr Vigilancia Sanitaria Vet, VISAVET, E-28040 Madrid, Spain
Univ Complutense Madrid, Fac Vet, Dept Sanidad Anim, E-28040 Madrid, SpainUniv Calgary, Dept Prod Anim Hlth, Fac Vet Med, Calgary, AB T2N 4N1, Canada
Aranaz, Alicia
[2
,3
]
De Buck, Jeroen
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机构:
Univ Calgary, Dept Prod Anim Hlth, Fac Vet Med, Calgary, AB T2N 4N1, CanadaUniv Calgary, Dept Prod Anim Hlth, Fac Vet Med, Calgary, AB T2N 4N1, Canada
De Buck, Jeroen
[1
]
机构:
[1] Univ Calgary, Dept Prod Anim Hlth, Fac Vet Med, Calgary, AB T2N 4N1, Canada
RESTRICTION ENDONUCLEASE ANALYSIS;
FIELD GEL-ELECTROPHORESIS;
DNA HYBRIDIZATION;
POLYMORPHISMS;
STRAINS;
SEQUENCE;
COMPLEX;
GENES;
GOATS;
D O I:
10.1128/JCM.02484-09
中图分类号:
Q93 [微生物学];
学科分类号:
071005 ;
100705 ;
摘要:
High-resolution melt (HRM) analysis can identify sequence polymorphisms by comparing the melting curves of amplicons generated by real-time PCR amplification. We describe the application of this technique to identify Mycobacterium avium subspecies paratuberculosis types I, II, and III. The HRM approach was based on type-specific nucleotide sequences in MAP1506, a member of the PPE (proline-proline-glutamic acid) gene family.
机构:
Ctr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
Ramirez, Melissa V.
Cowart, Kelley C.
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机构:
Ctr Dis Control & Prevent, Div Bacterial Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
Cowart, Kelley C.
Campbell, Patricia J.
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Ctr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
Campbell, Patricia J.
Morlock, Glenn P.
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h-index: 0
机构:
Ctr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
Morlock, Glenn P.
Sikes, David
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h-index: 0
机构:
Ctr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
Sikes, David
Winchell, Jonas M.
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机构:
Ctr Dis Control & Prevent, Div Bacterial Dis, Natl Ctr Immunizat & Resp Dis, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
Winchell, Jonas M.
Posey, James E.
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Ctr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USACtr Dis Control & Prevent, Div TB Eliminat, Natl Ctr HIV AIDS Viral Hepatitis STD & TB Preven, Atlanta, GA 30333 USA
机构:
Colorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USAColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Li, Wei
Matsuoka, Masanori
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机构:
Natl Inst Infect Dis, Leprosy Res Ctr, Tokyo, JapanColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Matsuoka, Masanori
Kai, Masanori
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机构:
Natl Inst Infect Dis, Leprosy Res Ctr, Tokyo, JapanColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Kai, Masanori
Thapa, Pratibha
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机构:
Anandaban Hosp, Mycobacterial Res Lab, Kathmandu, NepalColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Thapa, Pratibha
Khadge, Saraswoti
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h-index: 0
机构:
Anandaban Hosp, Mycobacterial Res Lab, Kathmandu, NepalColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Khadge, Saraswoti
Hagge, Deanna A.
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机构:
Anandaban Hosp, Mycobacterial Res Lab, Kathmandu, NepalColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Hagge, Deanna A.
Brennan, Patrick J.
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机构:
Colorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USAColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
Brennan, Patrick J.
Vissa, Varalakshmi
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机构:
Colorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USAColorado State Univ, Dept Microbiol Immunol & Pathol, Ft Collins, CO 80523 USA
机构:Public Authority of Agriculture Affairs & Fish Resources (PAAF),Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ)
Ahmad Alajmi
Günter Klein
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机构:Public Authority of Agriculture Affairs & Fish Resources (PAAF),Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ)
Günter Klein
Nils. Th. Grabowski
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机构:Public Authority of Agriculture Affairs & Fish Resources (PAAF),Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ)
Nils. Th. Grabowski
Svenja Fohler
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机构:Public Authority of Agriculture Affairs & Fish Resources (PAAF),Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ)
Svenja Fohler
Ömer Akineden
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机构:Public Authority of Agriculture Affairs & Fish Resources (PAAF),Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ)
Ömer Akineden
Amir Abdulmawjood
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机构:Public Authority of Agriculture Affairs & Fish Resources (PAAF),Institute for Food Quality and Food Safety, Research Center for Emerging Infections and Zoonoses (RIZ)