The complete chloroplast genome of Cinnamomum pittosporoides reveals its phylogenetic relationship in Lauraceae

被引：2

作者：

Zhou, Xiong-Li ^{[1
]}

Zhang, Li-Qin ^{[1
]}

Yang, Liu ^{[1
]}

Huang, Feng ^{[1
]}

Wang, Yue-Hua ^{[1
]}

Huang, Xing ^{[2
]}

Deng, Gang ^{[3
]}

Shen, Shi-Kang ^{[1
]}

机构：

[1] Yunnan Univ, Sch Life Sci, Kunming 650091, Yunnan, Peoples R China

[2] Chinese Acad Trop Agr Sci, Environm & Plant Protect Inst, Haikou, Hainan, Peoples R China

[3] Yunnan Univ, Sch Agr, Kunming 650091, Yunnan, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期

基金：

中国国家自然科学基金;

关键词：

Cinnamomum pittosporoides; phylogenetic; chloroplast genome; systematic position;

D O I：

10.1080/23802359.2019.1669503

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Cinnamomum pittosporoides is an important timber plant endemic to southwest of China. In the present study, we sequenced the complete chloroplast genome of C. pittosporoides and used the data to reveal the species phylogenetic in Lauraceae. The complete chloroplast genome showed a circular genome of 152,730 bp size with 39.2% GC content. The genome is of typical structure and contains a pair of inverted repeat (IR) regions with 20,074 bp, separated by one large single-copy (LSC) with 93,722 bp and one small single-copy (SSC) regions with 18,860 bp. The genome contained 116 genes, including 82 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. A phylogenetic tree reconstructed based on 26 chloroplast genomes reveals that C. pittosporoides is most related with C. chago in Lauraceae.

引用

页码：3246 / 3247

页数：2

共 50 条

[1] The complete chloroplast genome of Cinnamomum kanehirae Hayata (Lauraceae)
Wu, Chia-Chen
Ho, Cheng-Kuen
Chang, Shu-Hwa
[J]. MITOCHONDRIAL DNA PART A, 2016, 27 (04) : 2681 - 2682
[2] The complete chloroplast genome of Cinnamomum camphora and its comparison with related Lauraceae species
Chen, Caihui
Zheng, Yongjie
Liu, Sian
Zhong, Yongda
Wu, Yanfang
Li, Jiang
Xu, Li-An
Xu, Meng
[J]. PEERJ, 2017, 5
[3] The complete chloroplast genome of the aromatic tree species Cinnamomum tenuipile Kosterm (Lauraceae)
Zheng, Yongjie
Wu, YanFang
Xinliang, Liu
Chen, Yicun
Wang, YangDong
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (02): : 312 - 313
[4] Complete chloroplast genome of Cinnamomum japonicum (Laurales: Lauraceae), an endangered tree species
Ren, Xiaolong
Yang, Chao
Xin, Guiliang
Du, Xiaomin
Jia, Guolun
Hao, Nan
Liu, Huidong
Liu, Wenzhe
[J]. CONSERVATION GENETICS RESOURCES, 2019, 11 (03) : 267 - 269
[5] Complete chloroplast genome of Cinnamomum japonicum (Laurales: Lauraceae), an endangered tree species
Xiaolong Ren
Chao Yang
Guiliang Xin
Xiaomin Du
Guolun Jia
Nan Hao
Huidong Liu
Wenzhe Liu
[J]. Conservation Genetics Resources, 2019, 11 : 267 - 269
[6] The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
Lv, Qin
Liang, Bianjun
Guo, Xiaojuan
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (09): : 2770 - 2771
[7] The chloroplast genome of aromatic plants Cinnamomum burmanni (Lauraceae)
Yang, Yanping
Song, Yu
Xin, Peiyao
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3616 - 3617
[8] The chloroplast genome of aromatic plants Cinnamomum pauciflorum (Lauraceae)
Zheng, Yongjie
Chen, Yicun
Wu, YanFang
Liu, Xinliang
Wang, YangDong
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (04): : 585 - 586
[9] The Complete Chloroplast Genome Sequence of Machilus chuanchienensis (Lauraceae): Genome Structure and Phylogenetic Analysis
Bai, Xue
Peng, Juan
Yang, Yongyi
Xiong, Biao
[J]. GENES, 2022, 13 (12)
[10] The complete chloroplast genome sequence of Lindera fragrans (Lauraceae): genome structure and phylogenetic analysis
Bai, Xue
Peng, Juan
Xiong, Biao
[J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06): : 1194 - 1195

← 1 2 3 4 5 →