The Nature of Actin-Family Proteins in Chromatin-Modifying Complexes

被引:47
|
作者
Klages-Mundt, Naeh L. [1 ,2 ]
Kumar, Ashok [3 ]
Zhang, Yuexuan [4 ]
Kapoor, Prabodh [3 ]
Shen, Xuetong [1 ,2 ]
机构
[1] Univ Texas MD Anderson Canc Ctr, Dept Epigenet & Mol Carcinogenesis, Sci Pk Res Div, Houston, TX 77030 USA
[2] Univ Texas MD Anderson Canc Ctr, Program Genet & Epigenet, UTHlth Grad Sch Biomed Sci, Houston, TX 77030 USA
[3] Univ Texas Hlth Sci Ctr Tyler, Dept Cellular & Mol Biol, Tyler, TX USA
[4] Huazhong Univ Sci & Technol, Coll Life Sci & Technol, Key Lab Mol Biophys, Minist Educ, Wuhan, Hubei, Peoples R China
来源
FRONTIERS IN GENETICS | 2018年 / 9卷
关键词
nuclear actin; actin-related proteins; chromatin remodeling; INO80; complex; SWR1; SWI/SNF complex; NuA4; DNA repair; DOUBLE-STRAND BREAK; HISTONE VARIANT H2A.Z; FANCONI-ANEMIA PATHWAY; LOCUS-C EXPRESSION; DNA-DAMAGE SITES; NUCLEAR ACTIN; REMODELING COMPLEX; SACCHAROMYCES-CEREVISIAE; INO80; COMPLEX; EPIGENETIC CONTROL;
D O I
10.3389/fgene.2018.00398
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Actin is not only one of the most abundant proteins in eukaryotic cells, but also one of the most versatile. In addition to its familiar involvement in enabling contraction and establishing cellular motility and scaffolding in the cytosol, actin has well-documented roles in a variety of processes within the confines of the nucleus, such as transcriptional regulation and DNA repair. Interestingly, monomeric actin as well as actin-related proteins (Arps) are found as stoichiometric subunits of a variety of chromatin remodeling complexes and histone acetyltransferases, raising the question of precisely what roles they serve in these contexts. Actin and Arps are present in unique combinations in chromatin modifiers, helping to establish structural integrity of the complex and enabling a wide range of functions, such as recruiting the complex to nucleosomes to facilitate chromatin remodeling and promoting ATPase activity of the catalytic subunit. Actin and Arps are also thought to help modulate chromatin dynamics and maintain higher-order chromatin structure. Moreover, the presence of actin and Arps in several chromatin modifiers is necessary for promoting genomic integrity and an effective DNA damage response. In this review, we discuss the involvement of actin and Arps in these nuclear complexes that control chromatin remodeling and histone modifications, while also considering avenues for future study to further shed light on their functional importance.
引用
收藏
页数:16
相关论文
共 50 条
  • [31] Approaches to Study Native Chromatin-Modifying Complex Activities and Functions
    Galloy, Maxime
    Lachance, Catherine
    Cheng, Xue
    Distefano-Gagne, Felix
    Cote, Jacques
    Fradet-Turcotte, Amelie
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [32] Biological and bioinformatical approaches to study crosstalk of long-non-coding RNAs and chromatin-modifying proteins
    Backofen, Rolf
    Vogel, Tanja
    CELL AND TISSUE RESEARCH, 2014, 356 (03) : 507 - 526
  • [33] Cytoplasmic localization and nucleo-cytoplasmic shuttling of BAF53, a component of chromatin-modifying complexes
    Lee, JH
    Chang, SH
    Shim, JH
    Lee, JY
    Yoshida, M
    Kwon, H
    MOLECULES AND CELLS, 2003, 16 (01) : 78 - 83
  • [34] A chromatin-modifying function of JNK during stem cell differentiation
    Tiwari, Vijay K.
    Stadler, Michael B.
    Wirbelauer, Christiane
    Paro, Renato
    Schuebeler, Dirk
    Beisel, Christian
    NATURE GENETICS, 2012, 44 (01) : 94 - U134
  • [35] Biological and bioinformatical approaches to study crosstalk of long-non-coding RNAs and chromatin-modifying proteins
    Rolf Backofen
    Tanja Vogel
    Cell and Tissue Research, 2014, 356 : 507 - 526
  • [36] A chromatin-modifying function of JNK during stem cell differentiation
    Vijay K Tiwari
    Michael B Stadler
    Christiane Wirbelauer
    Renato Paro
    Dirk Schübeler
    Christian Beisel
    Nature Genetics, 2012, 44 : 94 - 100
  • [37] Small-molecule chromatin-modifying agents: therapeutic applications
    Mai, Antonello
    EPIGENOMICS, 2010, 2 (02) : 307 - 324
  • [38] Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
    Khalil, Ahmad M.
    Guttman, Mitchell
    Huarte, Maite
    Garber, Manuel
    Raj, Arjun
    Morales, Dianali Rivea
    Thomas, Kelly
    Presser, Aviva
    Bernstein, Bradley E.
    van Oudenaarden, Alexander
    Regev, Aviv
    Lander, Eric S.
    Rinn, John L.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (28) : 11667 - 11672
  • [39] Targeting of chromatin modifying complexes in chromatin
    Brown, C
    Hassan, A
    Howe, L
    Vignali, M
    Carrozza, M
    Neely, K
    Workman, JL
    FASEB JOURNAL, 2001, 15 (04): : A504 - A504
  • [40] Pluripotency associated genes are reactivated by chromatin-modifying agents in neurosphere cells
    Ruau, David
    Ensenat-Waser, Roberto
    Dinger, Timo C.
    Vallabhapurapu, Duttu S.
    Rolletschek, Alexandra
    Hacker, Christine
    Hieronymus, Thomas
    Wobus, Anna M.
    Mueller, Albrecht M.
    Zenke, Martin
    STEM CELLS, 2008, 26 (04) : 920 - 926