Ribonucleoside triphosphates promote T7 DNA replication and the lysis of T7-Infected Escherichia coli

被引:1
|
作者
Zou, Zhenyu [1 ,2 ]
Xu, Wendi [3 ]
Mi, Chenyang [1 ,2 ]
Xu, Ying [1 ,2 ]
Du, Ke [1 ,2 ]
Li, Bianbian [1 ,2 ]
Ye, Yang [4 ]
Ling, Yihui [5 ]
Zhang, Huidong [1 ,2 ]
机构
[1] Sichuan Univ, West China Sch Publ Hlth, Key Lab Environm & Female Reprod Hlth, Chengdu 610041, Sichuan, Peoples R China
[2] Sichuan Univ, West China Fourth Hosp, Chengdu 610041, Sichuan, Peoples R China
[3] North Minzu Univ, Coll Biol Sci & Engn, Ningxia 750021, Peoples R China
[4] Sun Yat Sen Mem Hosp, Dept Obstet & Gynecol, Yanjiang West Rd 107, Guangzhou 510120, Guangdong, Peoples R China
[5] Guangzhou Med Univ, Inst Chem Carcinogenesis, Guangzhou 510000, Guangdong, Peoples R China
关键词
Bacteriophage T7 DNA polymerase; rNTP and rNMP; dNTP incorporation; DNA replication; Lysis of Escherichia coli; KINETIC-ANALYSIS; CATALYTIC CORE; POLYMERASE; BYPASS; HELICASE; PROTEIN; BACTERIOPHAGE-T7; MISINCORPORATION; PRIMASE;
D O I
10.1016/j.biochi.2019.09.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
rNTPs are structurally similar to dNTPs, but their concentrations are much higher than those of dNTPs in cells. rNTPs in solutions or rNMP at the primer terminus or embedded in template always inhibit or block DNA replication, due to the reduced Mg2+ apparent concentration, competition of rNTPs with dNTPs, and the extra repulsive interaction of rNTP or rNMP with polymerase active site. In this work, unexpectedly, we found rNTPs can promote T7 DNA replication with the maximal promotion at rNTPs/dNTPs concentration ratio of 20. This promotion was not due to the optimized Mg2+ apparent concentration or the direct incorporation of extra rNMPs into DNA. This promotion was dependent on the concentrations and types of rNTPs. Kinetic analysis showed that this promotion was originated from the increased fraction of polymerase-DNA productive complex and the accelerated DNA polymerization. Further evidence showed that more polymerase-DNA complex was formed and their binding affinity was also enhanced in the presence of extra rNTPs. Moreover, this promotion in T7 DNA replication also accelerated the lysis of T7infected host Escherichia coli. This work discovered that rNTPs could promote DNA replication, completely different from the traditional concept that rNTPs always inhibit DNA replication. (C) 2019 Elsevier B.V. and Societe Francaise de Biochimie et Biologie Moleculaire (SFBBM). All rights reserved.
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页码:25 / 33
页数:9
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